RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NCOA1Q15788 1441 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 SMG6Q86US8 1419 aaKnown RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 A0A0B4J269 797 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 CCDC194A0A1B0GVG4 234 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 PIPSLA2A3N6 862 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 TRIM43BA6NCK2 446 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 MBD3L4A6NDZ8 208 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 MBD3L3A6NE82 208 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 TMEM233B4DJY2 109 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 FOXN3O00409 490 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 DCLK1O15075 740 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 TRIAP1O43715 76 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 FZD7O75084 574 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 MYL3P08590 195 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 EGR2P11161 476 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 SLC5A1P13866 664 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ANP32AP39687 249 aaKnown RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 PXNP49023 591 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 WNT3P56703 355 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 LILRA4P59901 499 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 RPS16P62249 146 aaKnown RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 BLOC1S1P78537 153 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 IFIT5Q13325 482 aaKnown RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 TUBB3Q13509 450 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 C3orf38Q5JPI3 329 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ABHD17BQ5VST6 288 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 DCAF12L1Q5VU92 463 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 IGFL4Q6B9Z1 124 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 TMEM108Q6UXF1 575 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 USP51Q70EK9 711 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 SESTD1Q86VW0 696 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 LCORLQ8N3X6 602 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 SSH3Q8TE77 659 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ASB10Q8WXI3 467 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 TRIM43Q96BQ3 446 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 STRBPQ96SI9 672 aaKnown RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 SIN3AQ96ST3 1273 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 OSBPL9Q96SU4 736 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 MS4A7Q9GZW8 240 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 CYP4F11Q9HBI6 524 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 PNPLA8Q9NP80 782 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 CASS4Q9NQ75 786 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ZSCAN32Q9NX65 697 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 COL20A1Q9P218 1284 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 SHOC2Q9UQ13 582 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 DMTF1Q9Y222 760 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 HS3ST3A1Q9Y663 406 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 UGGT2Q9NYU1 1516 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 ZNF608Q9ULD9 1512 aaPredicted RBP3.22□□□□□ -1.89
VPS41-206ENST00000418457 MTUS2Q5JR59 1369 aa3.22□□□□□ -1.89
VPS41-206ENST00000418457 MIA2Q96PC5 1412 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 PYCARD-AS1I3L0S3 204 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 RASSF9O75901 435 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 HKR1P10072 659 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 SRGNP10124 158 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 PPP3CBP16298 524 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 GATA3P23771 443 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 KLRC1P26715 233 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 CD6P30203 668 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 LRPAP1P30533 357 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 DEKP35659 375 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 PIK3CBP42338 1070 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 AVPR1BP47901 424 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 NEK3P51956 506 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 ZNF134P52741 427 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 ZXDAP98168 799 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 KRT17Q04695 432 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 SCAPQ12770 1279 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 DAG1Q14118 895 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 SF3B3Q15393 1217 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 MGAT5BQ3V5L5 792 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 RBM20Q5T481 1227 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 IL31Q6EBC2 164 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 SFRP4Q6FHJ7 346 aaPredicted RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 MICU3Q86XE3 530 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 Q8N1X5 172 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 B3GALNT2Q8NCR0 500 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 OR56A3Q8NH54 315 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 SLC30A5Q8TAD4 765 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 NEU4Q8WWR8 484 aaPredicted RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 RAPGEF4Q8WZA2 1011 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 LARP4BQ92615 738 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 SPSB4Q96A44 273 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 MSLNLQ96KJ4 702 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 Q96MF0 132 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 TBCBQ99426 244 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 NELL2Q99435 816 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 MESP1Q9BRJ9 268 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 NAA15Q9BXJ9 866 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 STK31Q9BXU1 1019 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 UNKQ9C0B0 810 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 KTN1Q86UP2 1357 aaKnown RBP3.21□□□□□ -1.9
VPS41-206ENST00000418457 LRRIQ1Q96JM4 1722 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 GRIN2BQ13224 1484 aa3.21□□□□□ -1.9
VPS41-206ENST00000418457 RNF123Q5XPI4 1314 aa3.2□□□□□ -1.9
VPS41-206ENST00000418457 FHOD3Q2V2M9 1422 aa3.2□□□□□ -1.9
VPS41-206ENST00000418457 F8W8V4 182 aa3.2□□□□□ -1.9
VPS41-206ENST00000418457 KPNA5O15131 536 aa3.2□□□□□ -1.9
VPS41-206ENST00000418457 IL18RAPO95256 599 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms