RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PSMD2Q13200 908 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 LRRC32Q14392 662 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 KNOP1Q1ED39 458 aaKnown RBP19.74■□□□□ 0.75
VPS16-204ENST00000417508 DGKKQ5KSL6 1271 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 SCARA3Q6AZY7 606 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 OSTM1Q86WC4 334 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 GPIHBP1Q8IV16 184 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 RDH13Q8NBN7 331 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 RUBCNQ92622 972 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 BLZF1Q9H2G9 400 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 KIF9Q9HAQ2 790 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 PTPRJQ12913 1337 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 CLIC2O15247 247 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 LILRB5O75023 590 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 NOL4O94818 638 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 PRAMEF12O95522 483 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 WARSP23381 471 aaKnown RBP19.73■□□□□ 0.75
VPS16-204ENST00000417508 AFMP43652 599 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 ZNF268Q14587 947 aaPredicted RBP19.73■□□□□ 0.75
VPS16-204ENST00000417508 DDR2Q16832 855 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 VSTM1Q6UX27 236 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 NELFCDQ8IXH7 590 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 SYNPOQ8N3V7 929 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 MAB21L3Q8N8X9 362 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 SUMF1Q8NBK3 374 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 FAM84AQ96KN4 292 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 CGRRF1Q99675 332 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 SLC39A2Q9NP94 309 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 TDP1Q9NUW8 608 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 MAGEC2Q9UBF1 373 aaPredicted RBP19.73■□□□□ 0.75
VPS16-204ENST00000417508 MAGED2Q9UNF1 606 aaPredicted RBP19.73■□□□□ 0.75
VPS16-204ENST00000417508 VPS13AQ96RL7 3174 aa19.73■□□□□ 0.75
VPS16-204ENST00000417508 SLC38A8A6NNN8 435 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 SPECC1L-ADORA2AF8WAN1 911 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 TACC1O75410 805 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 MYL1P05976 194 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 DLATP10515 647 aaKnown RBP19.72■□□□□ 0.75
VPS16-204ENST00000417508 CMA1P23946 247 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 CTHP32929 405 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 CYP2J2P51589 502 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 CUL4BQ13620 913 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 PKP1Q13835 747 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 ITPRIPL2Q3MIP1 535 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 SPEM1Q8N4L4 309 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 TMEM174Q8WUU8 243 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 KBTBD7Q8WVZ9 684 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 SPATA17Q96L03 361 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 MMS19Q96T76 1030 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 SYT15Q9BQS2 421 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 GKN1Q9NS71 199 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 GTSE1Q9NYZ3 720 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 SERTAD1Q9UHV2 236 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 CFAP54Q96N23 3096 aa19.72■□□□□ 0.75
VPS16-204ENST00000417508 STAU1O95793 577 aaKnown RBP19.71■□□□□ 0.75
VPS16-204ENST00000417508 CST3P01034 146 aaPredicted RBP19.71■□□□□ 0.75
VPS16-204ENST00000417508 LMO2P25791 158 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 ATICP31939 592 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 GNL1P36915 607 aaPredicted RBP19.71■□□□□ 0.75
VPS16-204ENST00000417508 CXCL12P48061 93 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 GPR15P49685 360 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 AP3M2P53677 418 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 AMPD2Q01433 879 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 TXNDC8Q6A555 127 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 FSIP1Q8NA03 581 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 USP13Q92995 863 aaPredicted RBP19.71■□□□□ 0.75
VPS16-204ENST00000417508 CCDC127Q96BQ5 260 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 ZFYVE19Q96K21 471 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 FAM83CQ9BQN1 747 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 EHD2Q9NZN4 543 aa19.71■□□□□ 0.75
VPS16-204ENST00000417508 WDR87Q6ZQQ6 2873 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 GPR179Q6PRD1 2367 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 EXOC3O60645 756 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 CASP1P29466 404 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 FOXK2Q01167 660 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 TRPC3Q13507 836 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 SDHAF4Q5VUM1 108 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 CC2D1AQ6P1N0 951 aaPredicted RBP19.7■□□□□ 0.74
VPS16-204ENST00000417508 SCN4BQ8IWT1 228 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 SPRYD3Q8NCJ5 442 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 MYCBPAPQ8TBZ2 947 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 PAGE5Q96GU1 130 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 SNX25Q9H3E2 840 aa19.7■□□□□ 0.74
VPS16-204ENST00000417508 OBSL1O75147 1896 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 ACTN4O43707 911 aaKnown RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 KLRC4O43908 158 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 ATP2C2O75185 946 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 PAPSS2O95340 614 aaPredicted RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 PDGFRBP09619 1106 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 TDGF1P13385 188 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 PFKLP17858 780 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 SOX9P48436 509 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 PDE6CP51160 858 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 TNNC1P63316 161 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 KRT85P78386 507 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 WDR72Q3MJ13 1102 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 SLC9A9Q8IVB4 645 aa19.69■□□□□ 0.74
VPS16-204ENST00000417508 GPR161Q8N6U8 529 aaKnown RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 SECISBP2LQ93073 1101 aaKnown RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 SYAP1Q96A49 352 aaPredicted RBP19.69■□□□□ 0.74
VPS16-204ENST00000417508 SPATA32Q96LK8 384 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms