RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 METTL5Q9NRN9 209 aaKnown RBP17■□□□□ 0.31
SNX6-202ENST00000396526 AKR1A1P14550 325 aa17■□□□□ 0.31
SNX6-202ENST00000396526 PTPN7P35236 360 aa17■□□□□ 0.31
SNX6-202ENST00000396526 IRAK1P51617 712 aa17■□□□□ 0.31
SNX6-202ENST00000396526 FSCN1Q16658 493 aaKnown RBP17■□□□□ 0.31
SNX6-202ENST00000396526 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
SNX6-202ENST00000396526 C17orf99Q6UX52 265 aa17■□□□□ 0.31
SNX6-202ENST00000396526 XYLT1Q86Y38 959 aa17■□□□□ 0.31
SNX6-202ENST00000396526 HACE1Q8IYU2 909 aa17■□□□□ 0.31
SNX6-202ENST00000396526 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
SNX6-202ENST00000396526 CXorf38Q8TB03 319 aa17■□□□□ 0.31
SNX6-202ENST00000396526 TWNKQ96RR1 684 aa17■□□□□ 0.31
SNX6-202ENST00000396526 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
SNX6-202ENST00000396526 TLDC2A0PJX2 215 aa17■□□□□ 0.31
SNX6-202ENST00000396526 SHOX2O60902 331 aaPredicted RBP17■□□□□ 0.31
SNX6-202ENST00000396526 GPD2P43304 727 aa17■□□□□ 0.31
SNX6-202ENST00000396526 CRYBB1P53674 252 aaPredicted RBP17■□□□□ 0.31
SNX6-202ENST00000396526 DRICH1Q6PGQ1 229 aaPredicted RBP17■□□□□ 0.31
SNX6-202ENST00000396526 UBA3Q8TBC4 463 aa17■□□□□ 0.31
SNX6-202ENST00000396526 CCDC77Q9BR77 488 aa17■□□□□ 0.31
SNX6-202ENST00000396526 KLHL11Q9NVR0 708 aa17■□□□□ 0.31
SNX6-202ENST00000396526 TSPAN16Q9UKR8 245 aa17■□□□□ 0.31
SNX6-202ENST00000396526 RECQL4O94761 1208 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 VPS41P49754 854 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 SNX17Q15036 470 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 TRIP13Q15645 432 aaPredicted RBP16.99■□□□□ 0.31
SNX6-202ENST00000396526 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 MAK16Q9BXY0 300 aaKnown RBP16.99■□□□□ 0.31
SNX6-202ENST00000396526 ZWILCHQ9H900 591 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 NOVA2Q9UNW9 492 aaKnown RBP16.99■□□□□ 0.31
SNX6-202ENST00000396526 DRG1Q9Y295 367 aaKnown RBP16.99■□□□□ 0.31
SNX6-202ENST00000396526 RGS16O15492 202 aaPredicted RBP16.99■□□□□ 0.31
SNX6-202ENST00000396526 ADCY6O43306 1168 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 GABRB2P47870 512 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 SLC29A2Q14542 456 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 ATP13A4Q4VNC1 1196 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 KCTD6Q8NC69 237 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 MCRS1Q96EZ8 462 aa16.99■□□□□ 0.31
SNX6-202ENST00000396526 KRT10P13645 584 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 MAP7D3Q8IWC1 876 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 SNX25Q9H3E2 840 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 HMGXB4Q9UGU5 601 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 R3HDM2Q9Y2K5 976 aaKnown RBP16.98■□□□□ 0.31
SNX6-202ENST00000396526 HAS3O00219 553 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 OGDHQ02218 1023 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 MFSD14CQ5VZR4 134 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 CNPY3Q9BT09 278 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 EIF2AQ9BY44 585 aaKnown RBP16.98■□□□□ 0.31
SNX6-202ENST00000396526 A8MXQ7 604 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 ERBB2P04626 1255 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 GPD1P21695 349 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 ITGA8P53708 1063 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 FBXO47Q5MNV8 452 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 ROPN1BQ9BZX4 212 aaPredicted RBP16.98■□□□□ 0.31
SNX6-202ENST00000396526 SEMA4AQ9H3S1 761 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 CNOT10Q9H9A5 744 aaKnown RBP16.98■□□□□ 0.31
SNX6-202ENST00000396526 ROPN1Q9HAT0 212 aaPredicted RBP16.98■□□□□ 0.31
SNX6-202ENST00000396526 CNTN3Q9P232 1028 aa16.98■□□□□ 0.31
SNX6-202ENST00000396526 hCG_1818297A0A087WSY0 165 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 EIF3HO15372 352 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX6-202ENST00000396526 MEFVO15553 781 aaPredicted RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 TREHO43280 583 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ITGBL1O95965 494 aaPredicted RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 PDGFRAP16234 1089 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ATP5DP30049 168 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 HNRNPH2P55795 449 aaKnown RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 SLC8A3P57103 927 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ZNF252P-AS1Q0IIN9 211 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 CCL14Q16627 93 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 GOLGA7BQ2TAP0 167 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 JOSD2Q8TAC2 188 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 LIASO43766 372 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 BEX3Q00994 111 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 BCAS4Q8TDM0 211 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 USP6NLQ92738 828 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 CDHR5Q9HBB8 845 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 FLRT1Q9NZU1 646 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 HES2Q9Y543 173 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 RASGRF2O14827 1237 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 PRPSAP2O60256 369 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 LRCH4O75427 683 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 RPLP2P05387 115 aaKnown RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 PCK1P35558 622 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ZNF143P52747 638 aaPredicted RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ZBTB6Q15916 424 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 IZUMO3Q5VZ72 239 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 C9orf57Q5W0N0 161 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ACOT1Q86TX2 421 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 ZDHHC17Q8IUH5 632 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 EMC1Q8N766 993 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 RAPGEF5Q92565 580 aa16.97■□□□□ 0.31
SNX6-202ENST00000396526 NXF3Q9H4D5 531 aaKnown RBP16.97■□□□□ 0.31
SNX6-202ENST00000396526 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms