RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 GDAP2Q9NXN4 497 aa18.82■□□□□ 0.6
EXOSC3-202ENST00000396521 CAVIN2O95810 425 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 CKMP06732 381 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 ARSAP15289 507 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 GAP43P17677 238 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 IFNAR2P48551 515 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 DMC1Q14565 340 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 ZC2HC1CQ53FD0 456 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 USP39Q53GS9 565 aaKnown RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 CRELD2Q6UXH1 353 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 DPH6Q7L8W6 267 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 DUSP15Q9H1R2 295 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 FBRSL1Q9HCM7 1045 aaKnown RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 DDX43Q9NXZ2 648 aaKnown RBP18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 EHD2Q9NZN4 543 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 STK17AQ9UEE5 414 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 ITGA11Q9UKX5 1188 aa18.81■□□□□ 0.6
EXOSC3-202ENST00000396521 BCLAF3A2AJT9 711 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 TFAMQ00059 246 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 ALCAMQ13740 583 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 ZNF77Q15935 545 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 CCDC6Q16204 474 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 INTS6LQ5JSJ4 861 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 EFCAB13Q8IY85 973 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 RPLP0P6Q8NHW5 317 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 HHIPQ96QV1 700 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 RXFP3Q9NSD7 469 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 R3HCC1Q9Y3T6 440 aaKnown RBP18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 CFAP47Q6ZTR5 3102 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 SPAG17Q6Q759 2223 aa18.8■□□□□ 0.6
EXOSC3-202ENST00000396521 GREB1Q4ZG55 1949 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 PPP1R37O75864 691 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 NFATC1O95644 943 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 GJB2P29033 226 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 ADSSP30520 456 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 POLR2BP30876 1174 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 MAGEA11P43364 429 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 RBP5P82980 135 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 CREB5Q02930 508 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 MAPRE1Q15691 268 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 DDR2Q16832 855 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 C4orf50Q6ZRC1 276 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 SPATA2LQ8IUW3 424 aaPredicted RBP18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 BRSK2Q8IWQ3 736 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 ACCSQ96QU6 501 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 EDEM2Q9BV94 578 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 STRA6Q9BX79 667 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 MRPL44Q9H9J2 332 aaKnown RBP18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 TMLHEQ9NVH6 421 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 CCDC39Q9UFE4 941 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 L1RE1Q9UN81 338 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 AGAP1Q9UPQ3 857 aa18.79■□□□□ 0.6
EXOSC3-202ENST00000396521 ZFHX4Q86UP3 3567 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 KIAA0391O15091 583 aaKnown RBP18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 ITGB3P05106 788 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 GARTP22102 1010 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 CYP2F1P24903 491 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 HOXC13P31276 330 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 PPP3CCP48454 512 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 USP4Q13107 963 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 KCNB1Q14721 858 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 EML3Q32P44 896 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 VSTM1Q6UX27 236 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 CSGALNACT2Q8N6G5 542 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 C1orf127Q8N9H9 656 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 TSTD1Q8NFU3 115 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 LRRC15Q8TF66 581 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 FAM213AQ9BRX8 229 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 TRPC7Q9HCX4 862 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 ARHGAP26Q9UNA1 814 aa18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.78■□□□□ 0.6
EXOSC3-202ENST00000396521 TISP43B9A030 160 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 GABRDO14764 452 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 KHNYNO15037 678 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 PROS1P07225 676 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 HDCP19113 662 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 GBP1P32455 592 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 DGKEP52429 567 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 PSMD2Q13200 908 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 HSF5Q4G112 596 aaPredicted RBP18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 SFR1Q86XK3 245 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 SPATA17Q96L03 361 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 PKMYT1Q99640 499 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 OLFML3Q9NRN5 406 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 GCNT4Q9P109 453 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 GTF3C4Q9UKN8 822 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 SMC3Q9UQE7 1217 aa18.77■□□□□ 0.6
EXOSC3-202ENST00000396521 SLC9A3R1O14745 358 aaPredicted RBP18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 TADA3O75528 432 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 ALDH1A2O94788 518 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 CEACAM1P13688 526 aa18.76■□□□□ 0.59
EXOSC3-202ENST00000396521 TXLNAP40222 546 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms