RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 EPB41L4BQ9H329 900 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 CENPHQ9H3R5 247 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 UBQLN1Q9UMX0 589 aaKnown RBP15.76■□□□□ 0.11
CBX3-202ENST00000396386 HES2Q9Y543 173 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 hCG_1818297A0A087WSY0 165 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 A6NNZ2 444 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 PPEF2O14830 753 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 IGHA2P01877 340 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 ITIH2P19823 946 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 INHBEP58166 350 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 SLC25A11Q02978 314 aaKnown RBP15.76■□□□□ 0.11
CBX3-202ENST00000396386 GOLGA7BQ2TAP0 167 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 KRT71Q3SY84 523 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 TUBB8Q3ZCM7 444 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 TFDP3Q5H9I0 405 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 KAZNQ674X7 775 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 SAPCD2Q86UD0 394 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 APOL6Q9BWW8 343 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 CXCL16Q9H2A7 254 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 GJD2Q9UKL4 321 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 TSPAN16Q9UKR8 245 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 SNX9Q9Y5X1 595 aa15.76■□□□□ 0.11
CBX3-202ENST00000396386 LIASO43766 372 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 LRCH4O75427 683 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 KRT10P13645 584 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 AKR1A1P14550 325 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 CYP3A5P20815 502 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 CDKN2BP42772 138 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
CBX3-202ENST00000396386 GNGT1P63211 74 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 ZSCAN26Q16670 478 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 GLRA4Q5JXX5 417 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 FAM102AQ5T9C2 384 aaPredicted RBP15.75■□□□□ 0.11
CBX3-202ENST00000396386 TXNRD3NBQ6F5E7 133 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 ALKAL1Q6UXT8 129 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 CCDC89Q8N998 374 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 UBA3Q8TBC4 463 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 TMEM40Q8WWA1 233 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 C18orf25Q96B23 403 aaPredicted RBP15.75■□□□□ 0.11
CBX3-202ENST00000396386 ZNF560Q96MR9 790 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
CBX3-202ENST00000396386 MRPL45Q9BRJ2 306 aaKnown RBP15.75■□□□□ 0.11
CBX3-202ENST00000396386 XPOTO43592 962 aaKnown RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 CD4P01730 458 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 RARGP13631 454 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 HOXC8P31273 242 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ZNF200P98182 395 aaPredicted RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 PURAQ00577 322 aaKnown RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 SREBF2Q12772 1141 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ACAP1Q15027 740 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 EMC10Q5UCC4 262 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 C9orf57Q5W0N0 161 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 DRICH1Q6PGQ1 229 aaPredicted RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 RHBDF2Q6PJF5 856 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 NME8Q8N427 588 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ARFGAP2Q8N6H7 521 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 EMC1Q8N766 993 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 RAPGEF5Q92565 580 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ACSF2Q96CM8 615 aaPredicted RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 FAM118BQ9BPY3 351 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 TRAIPQ9BWF2 469 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 TSPYL1Q9H0U9 437 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ZWILCHQ9H900 591 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 IVLP07476 585 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 SETSIPP0DME0 302 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 IVDP26440 423 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ADCY8P40145 1251 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ATP1A2P50993 1020 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 ITGA8P53708 1063 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 CRHR2Q13324 411 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 TRIP13Q15645 432 aaPredicted RBP15.74■□□□□ 0.11
CBX3-202ENST00000396386 GSTA5Q7RTV2 222 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 CROCCP2Q86T23 111 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 CCDC25Q86WR0 208 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 CCHCR1Q8TD31 782 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 PRDM4Q9UKN5 801 aa15.74■□□□□ 0.11
CBX3-202ENST00000396386 GRIN2DO15399 1336 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 KPNA6O60684 536 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 RNF8O76064 485 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 GPD1P21695 349 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 AKAP5P24588 427 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 IRAK1P51617 712 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 ADCY2Q08462 1091 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
CBX3-202ENST00000396386 UBXN11Q5T124 520 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 LRRC31Q6UY01 552 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 TRMT10CQ7L0Y3 403 aaKnown RBP15.73■□□□□ 0.11
CBX3-202ENST00000396386 UNC93AQ86WB7 457 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 SEMA4AQ9H3S1 761 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
CBX3-202ENST00000396386 ANAPC5Q9UJX4 755 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 EFR3BQ9Y2G0 817 aa15.73■□□□□ 0.11
CBX3-202ENST00000396386 C3orf70A6NLC5 250 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms