RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 METTL5Q9NRN9 209 aaKnown RBP20.13■□□□□ 0.81
ERCC2-203ENST00000391944 CNTN3Q9P232 1028 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 hCG_1818297A0A087WSY0 165 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 LIASO43766 372 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 ATF2P15336 505 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 CYP3A5P20815 502 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 CDKN2BP42772 138 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 SLC25A11Q02978 314 aaKnown RBP20.13■□□□□ 0.81
ERCC2-203ENST00000391944 SNX17Q15036 470 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 STILQ15468 1287 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 TRIP13Q15645 432 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-203ENST00000391944 ZNF365Q70YC5 407 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 IFNL1Q8IU54 200 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 CCDC89Q8N998 374 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 TRIM6Q9C030 488 aaPredicted RBP20.13■□□□□ 0.81
ERCC2-203ENST00000391944 NMRK2Q9NPI5 230 aa20.13■□□□□ 0.81
ERCC2-203ENST00000391944 PPEF2O14830 753 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 SHBGP04278 402 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 IVLP07476 585 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 KRT7P08729 469 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 ADCY8P40145 1251 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 BEX3Q00994 111 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 ACAP1Q15027 740 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 HADHQ16836 314 aaKnown RBP20.12■□□□□ 0.81
ERCC2-203ENST00000391944 DPH6Q7L8W6 267 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 ARFGAP2Q8N6H7 521 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 TMEM40Q8WWA1 233 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 TRAIPQ9BWF2 469 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 TSPYL1Q9H0U9 437 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 NXF3Q9H4D5 531 aaKnown RBP20.12■□□□□ 0.81
ERCC2-203ENST00000391944 AAASQ9NRG9 546 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 BCCIPQ9P287 314 aaKnown RBP eCLIP20.12■□□□□ 0.81
ERCC2-203ENST00000391944 TUBGCP4Q9UGJ1 667 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 TSPAN16Q9UKR8 245 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 SNX9Q9Y5X1 595 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 GRIN2DO15399 1336 aa20.12■□□□□ 0.81
ERCC2-203ENST00000391944 LRRD1A4D1F6 860 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 EIF3HO15372 352 aaKnown RBP eCLIP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 RECQL4O94761 1208 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 ZNF200P98182 395 aaPredicted RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 TRMT10CQ7L0Y3 403 aaKnown RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 HOOK3Q86VS8 718 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 EMC1Q8N766 993 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 SOCS4Q8WXH5 440 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 C18orf25Q96B23 403 aaPredicted RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 ACSF2Q96CM8 615 aaPredicted RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 APBA2Q99767 749 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 KATNAL1Q9BW62 490 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 LRRC4CQ9HCJ2 640 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 CALCOCO1Q9P1Z2 691 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 EFR3BQ9Y2G0 817 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 C3orf70A6NLC5 250 aaPredicted RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 RIPK2O43353 540 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 ITGA8P53708 1063 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 INHBEP58166 350 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 BYSLQ13895 437 aaKnown RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 RGMBQ6NW40 437 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 C12orf29Q8N999 325 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 BBOF1Q8ND07 529 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 MRPL45Q9BRJ2 306 aaKnown RBP20.11■□□□□ 0.81
ERCC2-203ENST00000391944 MIS12Q9H081 205 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 ANAPC5Q9UJX4 755 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 DNPEPQ9ULA0 475 aa20.11■□□□□ 0.81
ERCC2-203ENST00000391944 KLRC2P26717 231 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 IL1R2P27930 398 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 CHADLQ6NUI6 762 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 SAPCD2Q86UD0 394 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 CCDC25Q86WR0 208 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 IPO4Q8TEX9 1081 aaKnown RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 TMEM109Q9BVC6 243 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 UBQLN1Q9UMX0 589 aaKnown RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 NOVA2Q9UNW9 492 aaKnown RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 DRG1Q9Y295 367 aaKnown RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 C17orf102A2RUQ5 167 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 PFKMP08237 780 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 CRYBB1P53674 252 aaPredicted RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 GLRA4Q5JXX5 417 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 C9orf57Q5W0N0 161 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 TTC19Q6DKK2 380 aaPredicted RBP20.1■□□□□ 0.81
ERCC2-203ENST00000391944 NME8Q8N427 588 aa20.1■□□□□ 0.81
ERCC2-203ENST00000391944 AKAP5P24588 427 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 HOXC8P31273 242 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 HPDP32754 393 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 TAZQ16635 292 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 FSCN1Q16658 493 aaKnown RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 FAM102AQ5T9C2 384 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 GSTA5Q7RTV2 222 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 CROCCP2Q86T23 111 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 TLCD1Q96CP7 247 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 PGM2Q96G03 612 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 ZWILCHQ9H900 591 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 TNPO2O14787 897 aaKnown RBP20.09■□□□□ 0.81
ERCC2-203ENST00000391944 CAND2O75155 1236 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 RNF8O76064 485 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 GNAT1P11488 350 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 VPS41P49754 854 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 GOLGA7BQ2TAP0 167 aa20.09■□□□□ 0.81
ERCC2-203ENST00000391944 PKDCCQ504Y2 493 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms