RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 GPRC5AQ8NFJ5 357 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 ZNF571Q7Z3V5 609 aaPredicted RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 ILKAPQ9H0C8 392 aaPredicted RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 SYBUQ9NX95 663 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 AP1G2O75843 785 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 HMOX2P30519 316 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 MKRN4PQ13434 485 aaPredicted RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 BNC2Q6ZN30 1099 aaPredicted RBP20.5■□□□□ 0.87
SHANK1-203ENST00000391813 FRA10AC1Q70Z53 315 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 RNF139Q8WU17 664 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 SCN3BQ9NY72 215 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 MCM8Q9UJA3 840 aa20.5■□□□□ 0.87
SHANK1-203ENST00000391813 UNC5CO95185 931 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 IL1R1P14778 569 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 MRPL28Q13084 256 aaKnown RBP20.49■□□□□ 0.87
SHANK1-203ENST00000391813 CCNG2Q16589 344 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 TRPC5OSA6NMA1 111 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 ATMINO43313 823 aaPredicted RBP20.49■□□□□ 0.87
SHANK1-203ENST00000391813 EPHB2P29323 1055 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 IMPG1Q17R60 797 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 FAM83AQ86UY5 434 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 HORMAD1Q86X24 394 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 CROCCP3Q8IVE0 287 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 TCN1P20061 433 aaPredicted RBP20.49■□□□□ 0.87
SHANK1-203ENST00000391813 GRK2P25098 689 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 CDC42EP1Q00587 391 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 MCEEQ96PE7 176 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 SOX13Q9UN79 622 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 PCDHGC5Q9Y5F6 944 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 F8W8V4 182 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 SERPINI2O75830 405 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 WDR47O94967 919 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 ITGA4P13612 1032 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 RWDD4Q6NW29 188 aaKnown RBP20.49■□□□□ 0.87
SHANK1-203ENST00000391813 IYDQ6PHW0 289 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 MICU2Q8IYU8 434 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 ULK4Q96C45 1275 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 SPATA33Q96N06 139 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 ABCF3Q9NUQ8 709 aa20.49■□□□□ 0.87
SHANK1-203ENST00000391813 FAM205AQ6ZU69 1335 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 PDE2AO00408 941 aaPredicted RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 FGFR2P21802 821 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 IFI35P80217 286 aaPredicted RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 ZNF568Q3ZCX4 644 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 TASP1Q9H6P5 420 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 PCDHA10Q9Y5I2 948 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 POLBP06746 335 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 ADARP55265 1226 aaKnown RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 GRB10Q13322 594 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 MTFR1Q15390 333 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 STILQ15468 1287 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 SLC45A4Q5BKX6 768 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 TSPAN17Q96FV3 270 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 ATXN7L3BQ96GX2 97 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 SH3GL2Q99962 352 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 MRPL4Q9BYD3 311 aaKnown RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 SALL1Q9NSC2 1324 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 TMEM247A6NEH6 219 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 TPP2P29144 1249 aaPredicted RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 PEX5P50542 639 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 AQP5P55064 265 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 RIPK1Q13546 671 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 GSTA3Q16772 222 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 ZBED2Q9BTP6 218 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 KLHL25Q9H0H3 589 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 RUBCNLQ9H714 662 aa20.48■□□□□ 0.87
SHANK1-203ENST00000391813 GBA2Q9HCG7 927 aaPredicted RBP20.48■□□□□ 0.87
SHANK1-203ENST00000391813 KANSL1LA0AUZ9 987 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PSMD3O43242 534 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 RUNX1T1Q06455 604 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 LPCAT2Q7L5N7 544 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 ILDR1Q86SU0 546 aaPredicted RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PAFAH2Q99487 392 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 FAM118BQ9BPY3 351 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 MCL1Q07820 350 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 USP10Q14694 798 aaKnown RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PRMT6Q96LA8 375 aaPredicted RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 MTIF3Q9H2K0 278 aaKnown RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 COG4Q9H9E3 785 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PRR12Q9ULL5 1215 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 COMMD3-BMI1R4GMX3 469 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 H2AFYO75367 372 aaKnown RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 CCNJLQ8IV13 435 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 TEX12Q9BXU0 123 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 FOXN3O00409 490 aaPredicted RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 ATP9BO43861 1147 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PDGFRAP16234 1089 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 GCLCP48506 637 aaPredicted RBP20.47■□□□□ 0.87
SHANK1-203ENST00000391813 MROH9Q5TGP6 573 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 GJB7Q6PEY0 223 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 RIN3Q8TB24 985 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 PPP1R36Q96LQ0 422 aa20.47■□□□□ 0.87
SHANK1-203ENST00000391813 DCDC2Q9UHG0 476 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms