RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
FANCA-202ENST00000389301 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
FANCA-202ENST00000389301 CNGB3Q9NQW8 809 aa13□□□□□ -0.33
FANCA-202ENST00000389301 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
FANCA-202ENST00000389301 DDX18Q9NVP1 670 aaKnown RBP13□□□□□ -0.33
FANCA-202ENST00000389301 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
FANCA-202ENST00000389301 HPSEQ9Y251 543 aa13□□□□□ -0.33
FANCA-202ENST00000389301 DDX5P17844 614 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 PDPK2PQ6A1A2 396 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 TRIM65Q6PJ69 517 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 ZNF839A8K0R7 811 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 NPEPPSP55786 919 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 KRR1Q13601 381 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 PLA2G4FQ68DD2 849 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 TRAPPC9Q96Q05 1148 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 LATS2Q9NRM7 1088 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 LRCH1Q9Y2L9 728 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 E9PBE3 544 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 KLHL41O60662 606 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 EFL1Q7Z2Z2 1120 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 SNX31Q8N9S9 440 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 PPP2R3CQ969Q6 453 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 THUMPD3Q9BV44 507 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 ECE2O60344 883 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 H2AFYO75367 372 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 SOX6P35712 828 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 SERPINB8P50452 374 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 APPL2Q8NEU8 664 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 GDPD5Q8WTR4 605 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 PRCCQ92733 491 aaPredicted RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 DCUN1D1Q96GG9 259 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 SEMA4AQ9H3S1 761 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 EVPLLA8MZ36 301 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 SARSP49591 514 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 CSTF3Q12996 717 aaKnown RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 C11orf63Q6NUN7 778 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 CLEC10AQ8IUN9 316 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
FANCA-202ENST00000389301 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 OSGEPQ9NPF4 335 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
FANCA-202ENST00000389301 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 PDGFRBP09619 1106 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 RFC5P40937 340 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
FANCA-202ENST00000389301 STAT5BP51692 787 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 NME5P56597 212 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 PLIN5Q00G26 463 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 C16orf72Q14CZ0 275 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 FAM83EQ2M2I3 478 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 BTN2A2Q8WVV5 523 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 BTBD10Q9BSF8 475 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 IMPAD1Q9NX62 359 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 RIPK2O43353 540 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 TSC22D2O75157 780 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 FSBPO95073 299 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 RPA1P27694 616 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 EPHB2P29323 1055 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
FANCA-202ENST00000389301 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 ZBTB49Q6ZSB9 765 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 DENND5BQ6ZUT9 1274 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 DEFB107AQ8IZN7 70 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 HDAC7Q8WUI4 952 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 COL15A1P39059 1388 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 TM9SF1O15321 606 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 GRIK1P39086 918 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 PPP3CCP48454 512 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 ZNF844Q08AG5 666 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 PTK6Q13882 451 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 MAPRE1Q15691 268 aaKnown RBP12.98□□□□□ -0.33
FANCA-202ENST00000389301 TTI2Q6NXR4 508 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
FANCA-202ENST00000389301 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 UBE2Q2LH0YL09 131 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 CDC25CP30307 473 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 SPP2Q13103 211 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 GRB10Q13322 594 aa12.98□□□□□ -0.33
FANCA-202ENST00000389301 C2CD6Q53TS8 623 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms