RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 BMPR2Q13873 1038 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 IYDQ6PHW0 289 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ALKBH8Q96BT7 664 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 WDR11Q9BZH6 1224 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 EHMT1Q9H9B1 1298 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 APPL1Q9UKG1 709 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 EXOC7Q9UPT5 735 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 COL18A1P39060 1754 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ALOX15BO15296 676 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 PSTPIP1O43586 416 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 GNA15P30679 374 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ANKRD22Q5VYY1 191 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ATG16L1Q676U5 607 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 DNAJC24Q6P3W2 148 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 SV2AQ7L0J3 742 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 RSPH3Q86UC2 560 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 TREML1Q86YW5 311 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 E2F7Q96AV8 911 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 BLOC1S6Q9UL45 172 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 FAF1Q9UNN5 650 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 MAD1L1Q9Y6D9 718 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 UBE4BO95155 1302 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 DNAJC6O75061 913 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 NDUFB10O96000 172 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 KLRC2P26717 231 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 AQP4P55087 323 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 RBM44Q6ZP01 1051 aaKnown RBP11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 NET1Q7Z628 596 aaPredicted RBP11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 ARL10Q8N8L6 244 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 EXD1Q8NHP7 514 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 CALN1Q9BXU9 219 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 KLHL4Q9C0H6 718 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 EP400Q96L91 3159 aa11.68□□□□□ -0.54
NPC1L1-202ENST00000381160 DENND3A2RUS2 1198 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 OATP04181 439 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PEX2P28328 305 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 GPX6P59796 221 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 RPL7AP62424 266 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 BST1Q10588 318 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 NCOA4Q13772 614 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 KBTBD12Q3ZCT8 623 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 EFHC1Q5JVL4 640 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 FNBP1LQ5T0N5 605 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 ANKS1BQ7Z6G8 1248 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 GRIP2Q9C0E4 1043 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 TMEM8AQ9HCN3 771 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 IL1RAPL1Q9NZN1 696 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PCSK1NQ9UHG2 260 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 FAM155BO75949 473 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PDK3Q15120 406 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 TDRPQ86YL5 185 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 RFX6Q8HWS3 928 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 ZFPM1Q8IX07 1006 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 RCOR2Q8IZ40 523 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 FAM71DQ8N9W8 422 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 LENG1Q96BZ8 264 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 SRPK1Q96SB4 655 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 SPATA31A1Q5TZJ5 1347 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 KAT6AQ92794 2004 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 ALS2Q96Q42 1657 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 F8VP50 259 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 ZSCAN9O15535 394 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 TPD52L2O43399 206 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CYP3A4P08684 503 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 WEE2P0C1S8 567 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 DLG1Q12959 904 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PLA2G4FQ68DD2 849 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 DPH6Q7L8W6 267 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 DHDDSQ86SQ9 333 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 RBM12BQ8IXT5 1001 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 GSDMBQ8TAX9 411 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 IFT43Q96FT9 208 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 FIZ1Q96SL8 496 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 SENP7Q9BQF6 1050 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CYB561D2O14569 222 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CST8O60676 142 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 TM7SF2O76062 418 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CLPTM1O96005 669 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 CFHP08603 1231 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 NRLP54845 237 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 PSMC5P62195 406 aa11.67□□□□□ -0.54
NPC1L1-202ENST00000381160 SLC15A2Q16348 729 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms