RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 CDH22Q9UJ99 828 aa21.18■□□□□ 0.98
DDR1-228ENST00000376575 SIK3Q9Y2K2 1263 aa21.18■□□□□ 0.98
DDR1-228ENST00000376575 DENND4AQ7Z401 1863 aa21.18■□□□□ 0.98
DDR1-228ENST00000376575 TPM2P07951 284 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 ATF6P18850 670 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 CYP2F1P24903 491 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 ZNF132P52740 706 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 TWF1Q12792 350 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 ORC1Q13415 861 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 KLHDC7AQ5VTJ3 777 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 PTCRAQ6ISU1 281 aaPredicted RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 CES5AQ6NT32 575 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 VSTM1Q6UX27 236 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 SPATA2LQ8IUW3 424 aaPredicted RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 FUKQ8N0W3 1084 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 C12orf29Q8N999 325 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 TMEM176AQ96HP8 235 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 ERGIC2Q96RQ1 377 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 APOL5Q9BWW9 433 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 NAA15Q9BXJ9 866 aaKnown RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 UBE2TQ9NPD8 197 aaPredicted RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 RTN4Q9NQC3 1192 aaKnown RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 AVENQ9NQS1 362 aaPredicted RBP21.17■□□□□ 0.98
DDR1-228ENST00000376575 CEP72Q9P209 647 aa21.17■□□□□ 0.98
DDR1-228ENST00000376575 A0A1B0GTH6 734 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 RNF225M0QZC1 329 aaPredicted RBP21.16■□□□□ 0.98
DDR1-228ENST00000376575 CCL16O15467 120 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 XYLBO75191 536 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 NOL4O94818 638 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 BMP1P13497 986 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 MTHFRP42898 656 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 KCNQ1P51787 676 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 CDR1P51861 262 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 PLD1Q13393 1074 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 ATAT1Q5SQI0 421 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 FKBP15Q5T1M5 1219 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 GJB7Q6PEY0 223 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 SMG7Q92540 1137 aaKnown RBP21.16■□□□□ 0.98
DDR1-228ENST00000376575 CEP295NLQ96MC4 621 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 NECTIN4Q96NY8 510 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 HNRNPABQ99729 332 aaKnown RBP21.16■□□□□ 0.98
DDR1-228ENST00000376575 LRRC3Q9BY71 257 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 WDR6Q9NNW5 1121 aaKnown RBP21.16■□□□□ 0.98
DDR1-228ENST00000376575 TMEM30AQ9NV96 361 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 AJAP1Q9UKB5 411 aaPredicted RBP21.16■□□□□ 0.98
DDR1-228ENST00000376575 GREB1Q4ZG55 1949 aa21.16■□□□□ 0.98
DDR1-228ENST00000376575 PES1O00541 588 aaKnown RBP21.15■□□□□ 0.98
DDR1-228ENST00000376575 SOAT2O75908 522 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 LRG1P02750 347 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 BDNFP23560 247 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 ALDH1A3P47895 512 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 EPHA5P54756 1037 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 CYP27A1Q02318 531 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 CBX2Q14781 532 aaPredicted RBP21.15■□□□□ 0.98
DDR1-228ENST00000376575 MGAT5BQ3V5L5 792 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 ZNF394Q53GI3 561 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDR1-228ENST00000376575 SHC3Q92529 594 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 PSMG2Q969U7 264 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 RIPOR3Q96MK2 946 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 NAP1L5Q96NT1 182 aaPredicted RBP21.15■□□□□ 0.98
DDR1-228ENST00000376575 SEPT5Q99719 369 aaPredicted RBP21.15■□□□□ 0.98
DDR1-228ENST00000376575 ZNF518BQ9C0D4 1074 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 DNMT3BQ9UBC3 853 aaKnown RBP21.15■□□□□ 0.98
DDR1-228ENST00000376575 ASB3Q9Y575 518 aa21.15■□□□□ 0.98
DDR1-228ENST00000376575 SPDYE4A6NLX3 237 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 CLDN5O00501 218 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 TEX33O43247 280 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 PAEPP09466 180 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 IL9P15248 144 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 RFX1P22670 979 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 CACNA2D1P54289 1103 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 MFAP3P55082 362 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 UBXN1Q04323 297 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 NR1I3Q14994 352 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 ARHGAP17Q68EM7 881 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 TMEM270Q6UE05 265 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 FAM35AQ86V20 835 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 SPATA17Q96L03 361 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 C8orf48Q96LL4 319 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 GPR88Q9GZN0 384 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 GANQ9H2C0 597 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 POMKQ9H5K3 350 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 CSNK1G1Q9HCP0 422 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 KIAA1257Q9ULG3 409 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 FAM50BQ9Y247 325 aa21.14■□□□□ 0.97
DDR1-228ENST00000376575 GOLGA6L19H0YKK7 550 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 CCDC130P13994 396 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 UCHL3P15374 230 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 GPR15P49685 360 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 KLK7P49862 253 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 EPHB3P54753 998 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 RPL10AP62906 217 aaKnown RBP21.13■□□□□ 0.97
DDR1-228ENST00000376575 TPM4P67936 248 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 PPP1R26Q5T8A7 1209 aaPredicted RBP21.13■□□□□ 0.97
DDR1-228ENST00000376575 IQCEQ6IPM2 695 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 TMC8Q8IU68 726 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 SLC2A14Q8TDB8 520 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 CYFIP2Q96F07 1278 aa21.13■□□□□ 0.97
DDR1-228ENST00000376575 HEXIM2Q96MH2 286 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms