RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 POLIQ9UNA4 740 aa12.77□□□□□ -0.37
HMGCL-202ENST00000374487 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 RGS16O15492 202 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 RIPK2O43353 540 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 POLR2BP30876 1174 aaKnown RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 POU5F1BQ06416 359 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 ADCY2Q08462 1091 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 NFX1Q12986 1120 aaKnown RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PTK6Q13882 451 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 KAZNQ674X7 775 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PPTC7Q8NI37 304 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 FAM118BQ9BPY3 351 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 SPC25Q9HBM1 224 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 LRRC4CQ9HCJ2 640 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PPANQ9NQ55 473 aaKnown RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 STARD7Q9NQZ5 370 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 KLHL11Q9NVR0 708 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 ANAPC5Q9UJX4 755 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 LACTBL1A8MY62 500 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 E7EVH7 732 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 F8VP50 259 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PI4K2BG5E9Z4 385 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 VTNP04004 478 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 KRT1P04264 644 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 NFICP08651 508 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 ZNF286BP0CG31 522 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 MCF2P10911 925 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 VPS41P49754 854 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 CAV1Q03135 178 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 TLE2Q04725 743 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 ATP13A4Q4VNC1 1196 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 CYP4A22Q5TCH4 519 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 TRMT10CQ7L0Y3 403 aaKnown RBP12.76□□□□□ -0.37
HMGCL-202ENST00000374487 WDTC1Q8N5D0 677 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 CCDC89Q8N998 374 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PGM2Q96G03 612 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 CPB2Q96IY4 423 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 HTATIP2Q9BUP3 242 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 SYNCQ9H7C4 482 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
HMGCL-202ENST00000374487 PDE4DIPQ5VU43 2346 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 TJP3O95049 919 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 ITGB3P05106 788 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 MMP3P08254 477 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 ITGB8P26012 769 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 CDH5P33151 784 aaPredicted RBP12.75□□□□□ -0.37
HMGCL-202ENST00000374487 ITGA8P53708 1063 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 SEC24CP53992 1094 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 CDH8P55286 799 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 NKX3-2P78367 333 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 PURAQ00577 322 aaKnown RBP12.75□□□□□ -0.37
HMGCL-202ENST00000374487 LMNB2Q03252 620 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 LRRC38Q5VT99 294 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 JADE1Q6IE81 842 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 DENND1BQ6P3S1 775 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 B4GALNT4Q76KP1 1039 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 C3orf20Q8ND61 904 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 TRAIPQ9BWF2 469 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 CNOT10Q9H9A5 744 aaKnown RBP12.75□□□□□ -0.37
HMGCL-202ENST00000374487 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
HMGCL-202ENST00000374487 A6NJR5 290 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 GOLGA8SH3BPF8 625 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 MYO1CO00159 1063 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 KRT10P13645 584 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 P4HA1P13674 534 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 SMYD5Q6GMV2 418 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 BBOF1Q8ND07 529 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TLCD1Q96CP7 247 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 STMN4Q9H169 189 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 LHX5Q9H2C1 402 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 Q9Y3F1 56 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 H3BRB1 525 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 RASGRF2O14827 1237 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 PAEPP09466 180 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 KRT3P12035 628 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 TCF4P15884 667 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 IVDP26440 423 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 ORC1Q13415 861 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 KYAT1Q16773 422 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 NLRP14Q86W24 1093 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
HMGCL-202ENST00000374487 KAT2BQ92831 832 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
HMGCL-202ENST00000374487 SLITRK1Q96PX8 696 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms