RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 EPB41L4BQ9H329 900 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 MTRF1LQ9UGC7 380 aaKnown RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 HMGB1P1B2RPK0 211 aaPredicted RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 CYP3A5P20815 502 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 AKAP5P24588 427 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 MDH1P40925 334 aaKnown RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 GPD2P43304 727 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 YARSP54577 528 aaKnown RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 MYO1EQ12965 1108 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 CNGA2Q16280 664 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 RGMBQ6NW40 437 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 APBB1IPQ7Z5R6 666 aaPredicted RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 NIPA2Q8N8Q9 360 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 C12orf29Q8N999 325 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 PLEKHA5Q9HAU0 1116 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 GJD2Q9UKL4 321 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 PIN4Q9Y237 131 aaKnown RBP20.92■□□□□ 0.94
LHX3-202ENST00000371748 SNX9Q9Y5X1 595 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 CAPN7Q9Y6W3 813 aa20.92■□□□□ 0.94
LHX3-202ENST00000371748 SEC24CP53992 1094 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 CALCOCO2Q13137 446 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 UBAP2Q5T6F2 1119 aaKnown RBP20.91■□□□□ 0.94
LHX3-202ENST00000371748 CHADLQ6NUI6 762 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 SAPCD2Q86UD0 394 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 OTUD6BQ8N6M0 293 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 ATL2Q8NHH9 583 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 GRK7Q8WTQ7 553 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 ZNF473Q8WTR7 871 aaKnown RBP20.91■□□□□ 0.94
LHX3-202ENST00000371748 RAPGEF5Q92565 580 aa20.91■□□□□ 0.94
LHX3-202ENST00000371748 PIK3R2O00459 728 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 TNPO2O14787 897 aaKnown RBP20.9■□□□□ 0.94
LHX3-202ENST00000371748 RECQL4O94761 1208 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 FSBPO95073 299 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 CETN2P41208 172 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 VPS41P49754 854 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 PTK6Q13882 451 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 SNX17Q15036 470 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 CCNG2Q16589 344 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 ODF2Q5BJF6 829 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 LRRC38Q5VT99 294 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 YTHDF3Q7Z739 585 aaKnown RBP20.9■□□□□ 0.94
LHX3-202ENST00000371748 CCT8L2Q96SF2 557 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 APBA2Q99767 749 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 MRPL45Q9BRJ2 306 aaKnown RBP20.9■□□□□ 0.94
LHX3-202ENST00000371748 NT5C1AQ9BXI3 368 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 TSPAN16Q9UKR8 245 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 TP73O15350 636 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 KIAA0754O94854 1291 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 HMGCRP04035 888 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 SPOCD1Q6ZMY3 1216 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 ARFGAP1Q8N6T3 406 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 MYCBPAPQ8TBZ2 947 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 PABPC3Q9H361 631 aaKnown RBP20.9■□□□□ 0.94
LHX3-202ENST00000371748 SEMA4AQ9H3S1 761 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 HOMER3Q9NSC5 361 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 BCCIPQ9P287 314 aaKnown RBP eCLIP20.9■□□□□ 0.94
LHX3-202ENST00000371748 DERAQ9Y315 318 aa20.9■□□□□ 0.94
LHX3-202ENST00000371748 PDCD11Q14690 1871 aaKnown RBP20.9■□□□□ 0.94
LHX3-202ENST00000371748 LRRD1A4D1F6 860 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 LRCH4O75427 683 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 GAS8O95995 478 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 SHBGP04278 402 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 ZBTB6Q15916 424 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 SMTNL2Q2TAL5 461 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 SPDYCQ5MJ68 293 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 NLRP14Q86W24 1093 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 ZWILCHQ9H900 591 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 KLK14Q9P0G3 267 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 WDR35Q9P2L0 1181 aa20.89■□□□□ 0.94
LHX3-202ENST00000371748 CTGFP29279 349 aa20.89■□□□□ 0.93
LHX3-202ENST00000371748 IFFO1Q0D2I5 559 aa20.89■□□□□ 0.93
LHX3-202ENST00000371748 ZNF268Q14587 947 aaPredicted RBP20.89■□□□□ 0.93
LHX3-202ENST00000371748 FSCN1Q16658 493 aaKnown RBP20.89■□□□□ 0.93
LHX3-202ENST00000371748 CCDC25Q86WR0 208 aa20.89■□□□□ 0.93
LHX3-202ENST00000371748 BEST2Q8NFU1 509 aa20.89■□□□□ 0.93
LHX3-202ENST00000371748 WHRNQ9P202 907 aa20.89■□□□□ 0.93
LHX3-202ENST00000371748 C17orf102A2RUQ5 167 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 IVDP26440 423 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 GABRB2P47870 512 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 GSCP56915 257 aaPredicted RBP20.88■□□□□ 0.93
LHX3-202ENST00000371748 KRT71Q3SY84 523 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 KCNT1Q5JUK3 1230 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 ALKAL1Q6UXT8 129 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 SYDE1Q6ZW31 735 aaPredicted RBP20.88■□□□□ 0.93
LHX3-202ENST00000371748 PRUNE1Q86TP1 453 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 SNF8Q96H20 258 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 NME7Q9Y5B8 376 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 IL1R2P27930 398 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 SLC25A11Q02978 314 aaKnown RBP20.88■□□□□ 0.93
LHX3-202ENST00000371748 PDE4CQ08493 712 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 CRHR2Q13324 411 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 PCBP1Q15365 356 aaKnown RBP eCLIP20.88■□□□□ 0.93
LHX3-202ENST00000371748 LCLAT1Q6UWP7 414 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 ACOT1Q86TX2 421 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 MCRS1Q96EZ8 462 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 RNF39Q9H2S5 420 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 ZFYVE28Q9HCC9 887 aa20.88■□□□□ 0.93
LHX3-202ENST00000371748 DDX56Q9NY93 547 aaKnown RBP20.88■□□□□ 0.93
LHX3-202ENST00000371748 CNTN3Q9P232 1028 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms