RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PSMB9P28065 219 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 YWHAZP63104 245 aaKnown RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ARF5P84085 180 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 KCTD21Q4G0X4 260 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 UNC45BQ8IWX7 931 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 VPS37AQ8NEZ2 397 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 MED15Q96RN5 788 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 STK33Q9BYT3 514 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 CRLS1Q9UJA2 301 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 EIF3LQ9Y262 564 aaKnown RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ATP10BO94823 1461 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 PEG3Q9GZU2 1588 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 CST8O60676 142 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 PDHBP11177 359 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 IL5RAQ01344 420 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 PLA2G4FQ68DD2 849 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 NEK10Q6ZWH5 1172 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 METTL16Q86W50 562 aaKnown RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 EPHX4Q8IUS5 362 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 PADI4Q9UM07 663 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 AP4S1Q9Y587 144 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 TRIM49D1C9J1S8 452 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 FAM20BO75063 409 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 MMRN1Q13201 1228 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 PTGISQ16647 500 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 NAIF1Q69YI7 327 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 TMEM79Q9BSE2 394 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 KIFC1Q9BW19 673 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 GTF2H1P32780 548 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 HIST2H2ACQ16777 129 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 HIST2H2AA3Q6FI13 130 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 IPPQ9Y573 584 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 PEX1O43933 1283 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 FMO5P49326 533 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 NFYCQ13952 458 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 SCUBE1Q8IWY4 988 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 IZUMO1Q8IYV9 350 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 KIF2CQ99661 725 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 TRMT6Q9UJA5 497 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 SAC3D1A6NKF1 404 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 TRPC5OSA6NMA1 111 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 SYTL1Q8IYJ3 562 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 TFB1MQ8WVM0 346 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 RNFT2Q96EX2 444 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 C4BPBP20851 252 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 SNRNP35Q16560 246 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 CACHD1Q5VU97 1274 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 E4F1Q66K89 784 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 GUF1Q8N442 669 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 RNASE11Q8TAA1 199 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 KLHL4Q9C0H6 718 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 PAK5Q9P286 719 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 IRAK1P51617 712 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 INAQ16352 499 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 DGKDQ16760 1214 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
COL11A1-202ENST00000358392 ARHGEF12Q9NZN5 1544 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 IQCMA0A1B0GVH7 501 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 KLHL41O60662 606 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 MFN2O95140 757 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 PSMA3P25788 255 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 DSG3P32926 999 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 C10orf120Q5SQS8 335 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 ZNF618Q5T7W0 954 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 TRIQKQ629K1 86 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 DPP10Q8N608 796 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 ATG16L2Q8NAA4 619 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 SEMA4DQ92854 862 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 CATSPERBQ9H7T0 1116 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 CHST12Q9NRB3 414 aa11.6□□□□□ -0.55
COL11A1-202ENST00000358392 LRRIQ3A6PVS8 624 aaPredicted RBP11.59□□□□□ -0.55
COL11A1-202ENST00000358392 F5H6K3 240 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 ALDH1A2O94788 518 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 UCHL3P15374 230 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 ALOX12P18054 663 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 TGM2P21980 687 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 HSD17B3P37058 310 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 HSPA13P48723 471 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 KLRC3Q07444 240 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 ARMC4Q5T2S8 1044 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 TMCC3Q9ULS5 477 aa11.59□□□□□ -0.55
COL11A1-202ENST00000358392 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms