RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PIDD1Q9HB75 910 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 SCHIP1Q9P0W5 487 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 FARP1Q9Y4F1 1045 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-201ENST00000351677 GZMAP12544 262 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 TTC23LQ6PF05 361 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 CATSPERBQ9H7T0 1116 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 CDYLQ9Y232 598 aa16.68■□□□□ 0.26
PTPN11-201ENST00000351677 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SMIM22K7EJ46 135 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 MYO1DO94832 1006 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 TBX2Q13207 712 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SPDYAQ5MJ70 313 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SV2AQ7L0J3 742 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 IFNEQ86WN2 208 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 MUC3BQ9H195 1237 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 PHTF1Q9UMS5 762 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 RASSF10A6NK89 507 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 ZNF263O14978 683 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 MYL6P60660 151 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 OCA2Q04671 838 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 TRADDQ15628 312 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 FAM129AQ9BZQ8 928 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 DDX4Q9NQI0 724 aaKnown RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 GAS2O43903 313 aaKnown RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 KLHL2O95198 593 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 STIP1P31948 543 aaKnown RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 WHRNQ9P202 907 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SHCBP1LQ9BZQ2 653 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 RRN3P2A6NIE6 340 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SUPT3HB4E1H0 165 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 SUPT3HO75486 399 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 GNASQ5JWF2 1037 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 C6orf10Q5SRN2 563 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 C4orf19Q8IY42 314 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 EMC1Q8N766 993 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 DDX50Q9BQ39 737 aaKnown RBP16.67■□□□□ 0.26
PTPN11-201ENST00000351677 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 DDIT4Q9NX09 232 aa16.67■□□□□ 0.26
PTPN11-201ENST00000351677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 TMEM150BA6NC51 233 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CYTH3O43739 400 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 RARGP13631 454 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 SGF29Q96ES7 293 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 NSL1Q96IY1 281 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 AKAP10O43572 662 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 ZC3H11AO75152 810 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 STAG3L1P0CL83 205 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 IFNA8P32881 189 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CLEC16AQ2KHT3 1053 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 DCUN1D1Q96GG9 259 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 OLFM3Q96PB7 478 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 PDCD2LQ9BRP1 358 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 RUBCNLQ9H714 662 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 PMPCBO75439 489 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CCND1P24385 295 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 HDAC7Q8WUI4 952 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 L3MBTL3Q96JM7 780 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CISHQ9NSE2 258 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 UBQLN1Q9UMX0 589 aaKnown RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 ZBTB39O15060 712 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 GLB1LQ6UWU2 654 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 SHCBP1Q8NEM2 672 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CMTM5Q96DZ9 223 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
PTPN11-201ENST00000351677 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.66■□□□□ 0.26
PTPN11-201ENST00000351677 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 SLITRK3O94933 977 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 VDRP11473 427 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 CETPP11597 493 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 PROSCO94903 275 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 AVPR1AP37288 418 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 INPP5AQ14642 412 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 KCNK18Q7Z418 384 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 FAM172AQ8WUF8 416 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 WDCPQ9H6R7 721 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 IL1RL2Q9HB29 575 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 SLC30A1Q9Y6M5 507 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 PRPF4O43172 522 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTPN11-201ENST00000351677 PNPLA4P41247 253 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 TWF1Q12792 350 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 PGM5Q15124 567 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 C11orf63Q6NUN7 778 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 LAYNQ6UX15 382 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 C16orf89Q6UX73 402 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 C4orf22Q6V702 233 aa16.65■□□□□ 0.26
PTPN11-201ENST00000351677 ZCWPW1Q9H0M4 648 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms