RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SNX19Q92543 992 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 C8orf37Q96NL8 207 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNPEPQ9H4A4 650 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPCPD1Q9NPB8 672 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 LCMT1Q9UIC8 334 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 C3orf18Q9UK00 162 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ABCA8O94911 1581 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 KRT33AO76009 404 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 STAT3P40763 770 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TRADDQ15628 312 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 COLEC12Q5KU26 742 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DRICH1Q6PGQ1 229 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 R3HCC1LQ7Z5L2 792 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFNL2Q8IZJ0 200 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 MAGEC3Q8TD91 643 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CEP170P1Q96L14 293 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CRNNQ9UBG3 495 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 XPR1Q9UBH6 696 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GUCA1BQ9UMX6 200 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 FGAP02671 866 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 POU2F1P14859 743 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF18P17022 549 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 FHITP49789 147 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 HIC1Q14526 733 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RRAGAQ7L523 313 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DPPA2Q7Z7J5 298 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 PARGQ86W56 976 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SFR1Q86XK3 245 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 EPAS1Q99814 870 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPBP1L1Q9HC44 474 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHORDC1Q9UHD1 332 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC13A4Q9UKG4 626 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 DUSP12Q9UNI6 340 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC12A4Q9UP95 1085 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 MYH7BA7E2Y1 1941 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 FARP2O94887 1054 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANXA6P08133 673 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SPARCP09486 303 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GALNT3Q14435 633 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF846Q147U1 533 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SEMA6DQ8NFY4 1073 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ELOVL6Q9H5J4 265 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPP4R1LQ9P1A2 415 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 AK5Q9Y6K8 562 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 KNL1Q8NG31 2342 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CD40LGP29965 261 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 USP46P62068 366 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTF1Q15361 905 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 NXNL1Q96CM4 212 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RRNAD1Q96FB5 475 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ELMO2Q96JJ3 720 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GNG8Q9UK08 70 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF221Q9UK13 617 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TBC1D24Q9ULP9 559 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 L1RE1Q9UN81 338 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMEM2Q9UHN6 1383 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 RXRBP28702 533 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 KMT5BQ4FZB7 885 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZFP1Q6P2D0 407 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 BEND4Q6ZU67 534 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 SNX31Q8N9S9 440 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 PHC3Q8NDX5 983 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 GMIPQ9P107 970 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 TUBGCP4Q9UGJ1 667 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHD1O14646 1710 aa6.29□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZPR1O75312 459 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CPP00450 1065 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRKAR1AP10644 381 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RAB5CP51148 216 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RHBDL3P58872 404 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLFN5Q08AF3 891 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 NR1D2Q14995 579 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 ASB12Q8WXK4 309 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 RRAGDQ9NQL2 400 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC35C2Q9NQQ7 365 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PCDHGB4Q9UN71 923 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CNTRLQ7Z7A1 2325 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 FADS2P1A8MWK0 482 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SNAP29O95721 258 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRKCBP05771 671 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 IFNAR1P17181 557 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 MARK3P27448 753 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRKCEQ02156 737 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 PLEKHG6Q3KR16 790 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CWF19L1Q69YN2 538 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 IRGCQ6NXR0 463 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SCYL2Q6P3W7 929 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 SCARA5Q6ZMJ2 495 aa6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 DNAJB7Q7Z6W7 309 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-201ENST00000334218 CARNMT1Q8N4J0 409 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms