RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 IRGCQ6NXR0 463 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 LRRC6Q86X45 466 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 FAM151AQ8WW52 585 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 ZNF606Q8WXB4 792 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 PRR11Q96HE9 360 aaPredicted RBP14.12□□□□□ -0.15
SKA3-202ENST00000314759 PCMTD2Q9NV79 361 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 ARHGAP28Q9P2N2 729 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 STOML1Q9UBI4 398 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 GABBR1Q9UBS5 961 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 NUB1Q9Y5A7 615 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 ZNF541Q9H0D2 1346 aa14.12□□□□□ -0.15
SKA3-202ENST00000314759 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 GSC2O15499 205 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 RNF8O76064 485 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 STBD1O95210 358 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 RXRBP28702 533 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 GDF10P55107 478 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ZC3H18Q86VM9 953 aaKnown RBP14.11□□□□□ -0.15
SKA3-202ENST00000314759 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 SLC35B2Q8TB61 432 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ZFAND2BQ8WV99 257 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 CPT1BQ92523 772 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 GJD4Q96KN9 370 aaPredicted RBP14.11□□□□□ -0.15
SKA3-202ENST00000314759 TRIM4Q9C037 500 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 VPS11Q9H270 941 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PDLIM7Q9NR12 457 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.15
SKA3-202ENST00000314759 FETUBQ9UGM5 382 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 CNTN6Q9UQ52 1028 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 TELO2Q9Y4R8 837 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 TCRBV5S1A1TA0A578 114 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PLSCR1O15162 318 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 TBX10O75333 385 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 HAUS5O94927 633 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 LIG4P49917 911 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 RHPN2Q8IUC4 686 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ATP11CQ8NB49 1132 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 DCAKDQ8WVC6 231 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 RMDN3Q96TC7 470 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PDCD2LQ9BRP1 358 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 HAPLN2Q9GZV7 340 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 VCXQ9H320 206 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ACSS3Q9H6R3 686 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ZNF70Q9UC06 446 aaPredicted RBP14.11□□□□□ -0.15
SKA3-202ENST00000314759 LRCH1Q9Y2L9 728 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 CNTNAP1P78357 1384 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 YDJCA8MPS7 323 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 CAPN9O14815 690 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 TM9SF1O15321 606 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PHBP35232 272 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 PTPN7P35236 360 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 CACNA2D1P54289 1103 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 WDR60Q8WVS4 1066 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 DDX50Q9BQ39 737 aaKnown RBP14.11□□□□□ -0.15
SKA3-202ENST00000314759 TRIM55Q9BYV6 548 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 FBXO6Q9NRD1 293 aaPredicted RBP14.11□□□□□ -0.15
SKA3-202ENST00000314759 SCOCQ9UIL1 159 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 ZNRF3Q9ULT6 936 aa14.11□□□□□ -0.15
SKA3-202ENST00000314759 SERPINB3P29508 390 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 ZBTB41Q5SVQ8 909 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 PPIL6Q8IXY8 311 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 KBTBD2Q8IY47 623 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 TAB3Q8N5C8 712 aaPredicted RBP14.1□□□□□ -0.15
SKA3-202ENST00000314759 NAT8LQ8N9F0 302 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 FBXO36Q8NEA4 188 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 NSL1Q96IY1 281 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 EPAS1Q99814 870 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 TMEM39BQ9GZU3 492 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 IRAK4Q9NWZ3 460 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 AGO2Q9UKV8 859 aaKnown RBP14.1□□□□□ -0.15
SKA3-202ENST00000314759 MYH9P35579 1960 aaKnown RBP14.1□□□□□ -0.15
SKA3-202ENST00000314759 TCRBV7S3A2A0A539 114 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 GYG2O15488 501 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 MMP10P09238 476 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 KCNA3P22001 575 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 ARFIP2P53365 341 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 ARL4CP56559 192 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 DYNLT1P63172 113 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 LAMB3Q13751 1172 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 DCUN1D2Q6PH85 259 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 RFX8Q6ZV50 586 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 PCGF5Q86SE9 256 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 SEPT12Q8IYM1 358 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 ZBTB45Q96K62 511 aaPredicted RBP14.1□□□□□ -0.15
SKA3-202ENST00000314759 FGD4Q96M96 766 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 TSSK1BQ9BXA7 367 aa14.1□□□□□ -0.15
SKA3-202ENST00000314759 C3orf70A6NLC5 250 aaPredicted RBP14.09□□□□□ -0.15
SKA3-202ENST00000314759 ERFP50548 548 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 DNAJC24Q6P3W2 148 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 RINLQ6ZS11 566 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 OR5B17Q8NGF7 314 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 ACTL9Q8TC94 416 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 SKA1Q96BD8 255 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 ZNF341Q9BYN7 854 aa14.09□□□□□ -0.15
SKA3-202ENST00000314759 POLR3FQ9H1D9 316 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms