RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HSPA9P38646 679 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FMO5P49326 533 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 KBTBD12Q3ZCT8 623 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 RARS2Q5T160 578 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CDC42EP5Q6NZY7 148 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 LPCAT2Q7L5N7 544 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 IFNL1Q8IU54 200 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BBS7Q8IWZ6 715 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SMARCD1Q96GM5 515 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 QRFPRQ96P65 431 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CAMKK2Q96RR4 588 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SIKE1Q9BRV8 207 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SIK2Q9H0K1 926 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 WWP1Q9H0M0 922 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TBX20Q9UMR3 447 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BAZ2AQ9UIF9 1905 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 UBA6A0AVT1 1052 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM88BA6NKF7 163 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 PSMD12O00232 456 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ADCY3O60266 1144 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CHRNA5P30532 468 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TCF7P36402 384 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 AP2B1P63010 937 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SGCGQ13326 291 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CTTNQ14247 550 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 DRAP1Q14919 205 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF827Q17R98 1081 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FBXO47Q5MNV8 452 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FOXR2Q6PJQ5 311 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NOP9Q86U38 636 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SPIRE2Q8WWL2 714 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ING2Q9H160 280 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CARD9Q9H257 536 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 GANQ9H2C0 597 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 PIH1D3Q9NQM4 214 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MAN1C1Q9NR34 630 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 INTS7Q9NVH2 962 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 KIF17Q9P2E2 1029 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CAPN11Q9UMQ6 739 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SNX5Q9Y5X3 404 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NDUFB9Q9Y6M9 179 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ATP2C2O75185 946 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FGGP02679 453 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 HPGDP15428 266 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 HTR1BP28222 390 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 GPD2P43304 727 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 AIF1P55008 147 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ERVK-9P63128 1117 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ERVK-24P63145 666 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TMPRSS15P98073 1019 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MCL1Q07820 350 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 LEMD2Q8NC56 503 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BTBD6Q96KE9 485 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 HSPBP1Q9NZL4 362 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 APC2O95996 2303 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TXNDC9O14530 226 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ANGPT2O15123 496 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FTLP02792 175 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SERPINF2P08697 491 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CYP2A6P11509 494 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF24P17028 368 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 VCAM1P19320 739 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CXCR2P25025 360 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MAP2K5Q13163 448 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 BTG3Q14201 252 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ZDHHC20Q5W0Z9 365 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CHADLQ6NUI6 762 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SLC27A1Q6PCB7 646 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF589Q86UQ0 364 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 WDR49Q8IV35 697 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MB21D2Q8IYB1 491 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 COG1Q8WTW3 980 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 FBXO32Q969P5 355 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MRRFQ96E11 262 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 DNAJC7Q99615 494 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 MRPL17Q9NRX2 175 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 XRN1Q8IZH2 1706 aaKnown RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 LMO7Q8WWI1 1683 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 PIPSLA2A3N6 862 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SLC16A4O15374 487 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 LZTS3O60299 673 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NTSR2O95665 410 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ERVK-10P10266 1014 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 C4BPBP20851 252 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TRPC1P48995 793 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 NFRKBQ6P4R8 1299 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 RIOX2Q8IUF8 465 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 TRIM59Q8IWR1 403 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 ABRAQ8N0Z2 381 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 KRT78Q8N1N4 520 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SPATA18Q8TC71 538 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 KLHL29Q96CT2 875 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CYFIP2Q96F07 1278 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 DYNLL2Q96FJ2 89 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CEP19Q96LK0 163 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 SH3GL3Q99963 347 aa3.32□□□□□ -1.88
CLOCK-201ENST00000309964 CINPQ9BW66 212 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-201ENST00000309964 RUBCNLQ9H714 662 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms