RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SHCBP1Q8NEM2 672 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 NSUN6Q8TEA1 469 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HPS3Q969F9 1004 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 KLHL25Q9H0H3 589 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 IMPAD1Q9NX62 359 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 C3orf70A6NLC5 250 aaPredicted RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 RAD51CO43502 376 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 TRIM13O60858 407 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 RAB25P57735 213 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 MTM1Q13496 603 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 CENPLQ8N0S6 344 aaPredicted RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 ENKURQ8TC29 256 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 JADE3Q92613 823 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 CELF4Q9BZC1 486 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 CRB1P82279 1406 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 ITSN1Q15811 1721 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 IQGAP3Q86VI3 1631 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 PVALEFA0A1B0GWK0 134 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 AXIN1O15169 862 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 POLBP06746 335 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 ITIH2P19823 946 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 ATP1A4Q13733 1029 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 OASLQ15646 514 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 PTRHD1Q6GMV3 140 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 TADA1Q96BN2 335 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 C18orf8Q96DM3 657 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 DDX50Q9BQ39 737 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 OSBPL8Q9BZF1 889 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 SHCBP1LQ9BZQ2 653 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 PIN4Q9Y237 131 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 LINC00854A0A1B0GVQ3 168 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HIST1H2AGP0C0S8 130 aaPredicted RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HIST1H2ADP20671 130 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 SHC4Q6S5L8 630 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 C1orf131Q8NDD1 294 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 IPMKQ8NFU5 416 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HIST1H2AHQ96KK5 128 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 STRBPQ96SI9 672 aaKnown RBP5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HIST1H2AJQ99878 128 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 H2AFJQ9BTM1 129 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 C8orf4Q9NR00 106 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 APEX2Q9UBZ4 518 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 APPL1Q9UKG1 709 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 SOX13Q9UN79 622 aa5.78□□□□□ -1.48
CPSF2-201ENST00000298875 HOXC6P09630 235 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 MZF1P28698 734 aaPredicted RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 RGS7P49802 495 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 NFIL3Q16649 462 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 LRRC71Q8N4P6 559 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 PPP2R3CQ969Q6 453 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ZBTB10Q96DT7 871 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 TUFT1Q9NNX1 390 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 PDZK1P1A8MUH7 402 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 SMNDC1O75940 238 aaKnown RBP eCLIP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 KLHL2O95198 593 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 CYP2E1P05181 493 aaPredicted RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 CPA2P48052 419 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ZRANB3Q5FWF4 1079 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 CCDC149Q6ZUS6 474 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 BRINP3Q76B58 766 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 RBBP8Q99708 897 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ERVV-1B6SEH8 477 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ITGA8P53708 1063 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ITGA1P56199 1179 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 DLG4P78352 724 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 P3H2Q8IVL5 708 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 TTC39CQ8N584 583 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 B3GALT6Q96L58 329 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 NOD2Q9HC29 1040 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 FAM153AQ9UHL3 310 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 FAM196BA6NMK8 535 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 TK2O00142 265 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 TDP2O95551 362 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 WEE2P0C1S8 567 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 RPS7P62081 194 aaKnown RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ATP2C1P98194 919 aaPredicted RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 MROH9Q5TGP6 573 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 CLEC17AQ6ZS10 378 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 LRRC49Q8IUZ0 686 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 DENND6AQ8IWF6 608 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 GTF3C2Q8WUA4 911 aaPredicted RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 PDLIM2Q96JY6 352 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ECSITQ9BQ95 431 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 KRT84Q9NSB2 600 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ERBB3P21860 1342 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 KLHL41O60662 606 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 CDH16O75309 829 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 PDGFRAP16234 1089 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 SPRP35270 261 aaPredicted RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 ARPC4P59998 168 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 COX10Q12887 443 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 KYAT1Q16773 422 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 WDR72Q3MJ13 1102 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 SWT1Q5T5J6 900 aaKnown RBP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 MFSD4BQ5TF39 518 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 OTOAQ7RTW8 1153 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 COA1Q9GZY4 146 aa5.77□□□□□ -1.49
CPSF2-201ENST00000298875 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.77□□□□□ -1.49
CPSF2-201ENST00000298875 SLC39A10Q9ULF5 831 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms