RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TUFMP49411 452 aaKnown RBP24.01■■□□□ 1.43
LINC01116-201ENST00000295549 CYP27A1Q02318 531 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 CCDC85BQ15834 202 aaPredicted RBP24.01■■□□□ 1.43
LINC01116-201ENST00000295549 LIN9Q5TKA1 542 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 PAQR9Q6ZVX9 377 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 FUKQ8N0W3 1084 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 CYFIP2Q96F07 1278 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 SPAG5Q96R06 1193 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 MYO6Q9UM54 1294 aa24.01■■□□□ 1.43
LINC01116-201ENST00000295549 SPTBN5Q9NRC6 3674 aaKnown RBP24■■□□□ 1.43
LINC01116-201ENST00000295549 PRRG1O14668 218 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 ZMYND10O75800 440 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 PAPLNO95428 1278 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 C8AP07357 584 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 USP8P40818 1118 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 SGO2Q562F6 1265 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 ARHGAP17Q68EM7 881 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 VSTM1Q6UX27 236 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 CACNA2D4Q7Z3S7 1137 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 VSTM4Q8IW00 320 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 SLC7A14Q8TBB6 771 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 SLC2A14Q8TDB8 520 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 FAM49BQ9NUQ9 324 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 CLDND1Q9NY35 253 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 SLC27A5Q9Y2P5 690 aa24■■□□□ 1.43
LINC01116-201ENST00000295549 CYP26A1O43174 497 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 HAPLN1P10915 354 aaPredicted RBP23.99■■□□□ 1.43
LINC01116-201ENST00000295549 CCDC130P13994 396 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 HOXB8P17481 243 aaPredicted RBP23.99■■□□□ 1.43
LINC01116-201ENST00000295549 CYP2F1P24903 491 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 HOXA9P31269 272 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 CLCN1P35523 988 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 LTBRP36941 435 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 CDR1P51861 262 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 PPP1R26Q5T8A7 1209 aaPredicted RBP23.99■■□□□ 1.43
LINC01116-201ENST00000295549 SPECC1LQ69YQ0 1117 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 MRFAP1L1Q96HT8 127 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 ZDHHC7Q9NXF8 308 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 CLEC1BQ9P126 229 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.99■■□□□ 1.43
LINC01116-201ENST00000295549 ATP8B3O60423 1300 aa23.99■■□□□ 1.43
LINC01116-201ENST00000295549 REV3LO60673 3130 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 A0A1W2PQJ5 194 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 HNRNPA1P09651 372 aaKnown RBP eCLIP23.98■■□□□ 1.43
LINC01116-201ENST00000295549 PNMA6AP0CW24 399 aaPredicted RBP23.98■■□□□ 1.43
LINC01116-201ENST00000295549 CD19P15391 556 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 BDNFP23560 247 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 SOX5P35711 763 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 STAT1P42224 750 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 ZNF75DP51815 510 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 BPIFB4P59827 614 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 PTK2Q05397 1052 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 STILQ15468 1287 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 ANKRD54Q6NXT1 300 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 TTC9BQ8N6N2 239 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 CMASQ8NFW8 434 aaPredicted RBP23.98■■□□□ 1.43
LINC01116-201ENST00000295549 BAP1Q92560 729 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 ZNF518BQ9C0D4 1074 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 INSL5Q9Y5Q6 135 aa23.98■■□□□ 1.43
LINC01116-201ENST00000295549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.97■■□□□ 1.43
LINC01116-201ENST00000295549 CLDN5O00501 218 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 TBX10O75333 385 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 CNGA2Q16280 664 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 MGAT5BQ3V5L5 792 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 PPM1LQ5SGD2 360 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 FAM35AQ86V20 835 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 MAFAQ8NHW3 353 aaPredicted RBP23.97■■□□□ 1.43
LINC01116-201ENST00000295549 PPM1EQ8WY54 764 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 TFAP2BQ92481 460 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 SMARCD1Q96GM5 515 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 SEPT5Q99719 369 aaPredicted RBP23.97■■□□□ 1.43
LINC01116-201ENST00000295549 MED10Q9BTT4 135 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 RHOBTB2Q9BYZ6 727 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 SFXN1Q9H9B4 322 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 YIPF1Q9Y548 306 aa23.97■■□□□ 1.43
LINC01116-201ENST00000295549 EYSQ5T1H1 3165 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 O00370 1275 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 RFPL2O75678 378 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 POU2F2P09086 479 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 GNA15P30679 374 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 ALDH1A3P47895 512 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 DLX2Q07687 328 aaPredicted RBP23.96■■□□□ 1.43
LINC01116-201ENST00000295549 PLD1Q13393 1074 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 SKIV2LQ15477 1246 aaKnown RBP23.96■■□□□ 1.43
LINC01116-201ENST00000295549 LCLAT1Q6UWP7 414 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 FMNL3Q8IVF7 1028 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 CEP295NLQ96MC4 621 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 ZSWIM1Q9BR11 485 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 CAPN11Q9UMQ6 739 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 PLXNA3P51805 1871 aa23.96■■□□□ 1.43
LINC01116-201ENST00000295549 SPDYE4A6NLX3 237 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 ADORA2BP29275 332 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 RPL10AP62906 217 aaKnown RBP23.95■■□□□ 1.42
LINC01116-201ENST00000295549 SYCE2Q6PIF2 218 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 SLC47A2Q86VL8 602 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 ANKRD52Q8NB46 1076 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 ZNF606Q8WXB4 792 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 MSLNLQ96KJ4 702 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 C8orf48Q96LL4 319 aa23.95■■□□□ 1.42
LINC01116-201ENST00000295549 DUSP16Q9BY84 665 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms