RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 NET1Q7Z628 596 aaPredicted RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 POU5F2Q8N7G0 328 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 OR6Y1Q8NGX8 325 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 PPP1R14CQ8TAE6 165 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 RSAD2Q8WXG1 361 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 SERAC1Q96JX3 654 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 MRPL47Q9HD33 250 aaKnown RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 AVENQ9NQS1 362 aaPredicted RBP10.76□□□□□ -0.69
LMX1A-201ENST00000294816 POLLQ9UGP5 575 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
LMX1A-201ENST00000294816 IQANK1A0A1B0GTG1 560 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 PDE5AO76074 875 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 IL1R1P14778 569 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 AQP5P55064 265 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 SLC25A3Q00325 362 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 UBAP2LQ14157 1087 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 WDR44Q5JSH3 913 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 TMEM270Q6UE05 265 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 LCA5Q86VQ0 697 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 CFAP36Q96G28 342 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 DNAAF2Q9NVR5 837 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 SHOC2Q9UQ13 582 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 DCAF8L1A6NGE4 600 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 PRR5-ARHGAP8B1AHC4 643 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 TNNI1P19237 187 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 VCPP55072 806 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 ARHGAP8P85298 464 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 MAMLD1Q13495 774 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 PRKD1Q15139 912 aaPredicted RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 TRIP10Q15642 601 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 ADGRD1Q6QNK2 874 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 RCOR2Q8IZ40 523 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 PPM1NQ8N819 430 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 MKL1Q969V6 931 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 ALKBH8Q96BT7 664 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 SLITRK1Q96PX8 696 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 ARHGEF4Q9NR80 690 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 DDX18Q9NVP1 670 aaKnown RBP10.75□□□□□ -0.69
LMX1A-201ENST00000294816 TAGLN3Q9UI15 199 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 MYPNQ86TC9 1320 aa10.75□□□□□ -0.69
LMX1A-201ENST00000294816 DNAJC6O75061 913 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 FAM155BO75949 473 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 TM7SF2O76062 418 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 LSAMPQ13449 338 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 HIC1Q14526 733 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 CHI3L2Q15782 390 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SMTNL2Q2TAL5 461 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SFT2D3Q587I9 215 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 BRDTQ58F21 947 aaPredicted RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 TXNRD3NBQ6F5E7 133 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SPOCD1Q6ZMY3 1216 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PDIK1LQ8N165 341 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 ZNF276Q8N554 614 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 AZIN2Q96A70 460 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 FAM213AQ9BRX8 229 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 ACSS3Q9H6R3 686 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 KCND2Q9NZV8 630 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PRR12Q9ULL5 1215 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PCDHB2Q9Y5E7 798 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 F8VP50 259 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 MAGEC1O60732 1142 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 GPC3P51654 580 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 RAP1GDS1P52306 607 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 NRLP54845 237 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 AQP4P55087 323 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 ACTR3P61158 418 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 BST1Q10588 318 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 TMED1Q13445 227 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 MYBPC3Q14896 1274 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 DNAL1Q4LDG9 190 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PLA2G4FQ68DD2 849 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PTF1AQ7RTS3 328 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 MYLK4Q86YV6 388 aaPredicted RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 DCAKDQ8WVC6 231 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SNRNP27Q8WVK2 155 aaKnown RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 ARHGEF1Q92888 912 aaKnown RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 APOPT1Q96IL0 206 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 MCEEQ96PE7 176 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 MIS12Q9H081 205 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 XPO7Q9UIA9 1087 aaKnown RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PHF24Q9UPV7 400 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SLC4A7Q9Y6M7 1214 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 TCRBV7S3A2A0A539 114 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 TRIM49D1C9J1S8 452 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 F8W8V4 182 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 C6orf222P0C671 652 aaPredicted RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 GDF10P55107 478 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 SOX10P56693 466 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 PSMC5P62195 406 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 BTKQ06187 659 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 R3HDM1Q15032 1099 aaKnown RBP10.74□□□□□ -0.69
LMX1A-201ENST00000294816 KBTBD12Q3ZCT8 623 aa10.74□□□□□ -0.69
LMX1A-201ENST00000294816 XKR9Q5GH70 373 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms