RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 TAF5Q15542 800 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 RAB6CQ53S08 254 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 AGBL2Q5U5Z8 902 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 EMC10Q5UCC4 262 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 RHBDF2Q6PJF5 856 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 RAB6CQ9H0N0 254 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 C10orf88Q9H8K7 445 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 CYP3A43Q9HB55 503 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 TMEM51Q9NW97 253 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 ANAPC5Q9UJX4 755 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 GJD2Q9UKL4 321 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 hCG_1818297A0A087WSY0 165 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 RRN3P2A6NIE6 340 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 TREHO43280 583 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 LIASO43766 372 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 GRAP2O75791 330 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 F2P00734 622 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 CD48P09326 243 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 SLC25A11Q02978 314 aaKnown RBP20.32■□□□□ 0.84
BRAF-201ENST00000288602 SH3PXD2AQ5TCZ1 1133 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 NIPA2Q8N8Q9 360 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 HOMER3Q9NSC5 361 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 KLK14Q9P0G3 267 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 FEZ2Q9UHY8 353 aaPredicted RBP20.32■□□□□ 0.84
BRAF-201ENST00000288602 TSPAN16Q9UKR8 245 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 ZNF148Q9UQR1 794 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 NRCAMQ92823 1304 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 ANKRD65E5RJM6 399 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 TULP2O00295 520 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 HCRTO43612 131 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 TJP3O95049 919 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 ZNF865P0CJ78 1059 aaPredicted RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 VDRP11473 427 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 CDKN2BP42772 138 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 BYSLQ13895 437 aaKnown RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 MFSD10Q14728 455 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 KYAT1Q16773 422 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 TFDP3Q5H9I0 405 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 LRRC38Q5VT99 294 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 SLC27A1Q6PCB7 646 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 SLC5A4Q9NY91 659 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 CWC15Q9P013 229 aaKnown RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 NME7Q9Y5B8 376 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 MYL3P08590 195 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 RGS7P49802 495 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 IFI35P80217 286 aaPredicted RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 TAF1CQ15572 869 aaPredicted RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 CNGA2Q16280 664 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 P3H1Q32P28 736 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 FAM102AQ5T9C2 384 aaPredicted RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 SYDE1Q6ZW31 735 aaPredicted RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 ACOT1Q86TX2 421 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 MDM1Q8TC05 714 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 PPANQ9NQ55 473 aaKnown RBP20.31■□□□□ 0.84
BRAF-201ENST00000288602 FAM49BQ9NUQ9 324 aa20.31■□□□□ 0.84
BRAF-201ENST00000288602 ZNF157P51786 506 aaPredicted RBP20.3■□□□□ 0.84
BRAF-201ENST00000288602 PPP2R2AP63151 447 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 DCAF4L1Q3SXM0 396 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 PPP1R26Q5T8A7 1209 aaPredicted RBP20.3■□□□□ 0.84
BRAF-201ENST00000288602 TRAIPQ9BWF2 469 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 NT5C1AQ9BXI3 368 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
BRAF-201ENST00000288602 SLC12A6Q9UHW9 1150 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 LCMT1Q9UIC8 334 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 C3orf70A6NLC5 250 aaPredicted RBP20.3■□□□□ 0.84
BRAF-201ENST00000288602 E5RJQ4 531 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 KLRC2P26717 231 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 CDR1P51861 262 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 INCA1Q0VD86 236 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 MYO1EQ12965 1108 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 KYNUQ16719 465 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 LONRF1Q17RB8 773 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 IZUMO3Q5VZ72 239 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 HOOK3Q86VS8 718 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 SNX27Q96L92 541 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 TMEM121Q9BTD3 319 aa20.3■□□□□ 0.84
BRAF-201ENST00000288602 HMGCRP04035 888 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 DARSP14868 501 aaKnown RBP20.29■□□□□ 0.84
BRAF-201ENST00000288602 HSPH1Q92598 858 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 TLCD1Q96CP7 247 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 FAM107BQ9H098 131 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 RNF39Q9H2S5 420 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 PIN4Q9Y237 131 aaKnown RBP20.29■□□□□ 0.84
BRAF-201ENST00000288602 RECQL4O94761 1208 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 PFKMP08237 780 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 ZNF268Q14587 947 aaPredicted RBP20.29■□□□□ 0.84
BRAF-201ENST00000288602 FAM182AQ5T1J6 154 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 TRNP1Q6NT89 227 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 NOTUMQ6P988 496 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 SESTD1Q86VW0 696 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 CCDC89Q8N998 374 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 MCRS1Q96EZ8 462 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 FAXDC2Q96IV6 333 aa20.29■□□□□ 0.84
BRAF-201ENST00000288602 DDX56Q9NY93 547 aaKnown RBP20.29■□□□□ 0.84
BRAF-201ENST00000288602 RGS16O15492 202 aaPredicted RBP20.28■□□□□ 0.84
BRAF-201ENST00000288602 MIPP30301 263 aa20.28■□□□□ 0.84
BRAF-201ENST00000288602 YARSP54577 528 aaKnown RBP20.28■□□□□ 0.84
BRAF-201ENST00000288602 PTGISQ16647 500 aa20.28■□□□□ 0.84
BRAF-201ENST00000288602 CDO1Q16878 200 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms