RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 GDF3Q9NR23 364 aa14.18□□□□□ -0.14
TNFRSF8-201ENST00000263932 PCDHA3Q9Y5H8 950 aa14.18□□□□□ -0.14
TNFRSF8-201ENST00000263932 I3L4J1 428 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 MED7O43513 233 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TSPAN1O60635 241 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 UPP2O95045 317 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CALB1P05937 261 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 PDGFRAP16234 1089 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CHRNA3P32297 505 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 IRX4P78413 519 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 KRT81Q14533 505 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TAF5Q15542 800 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CCDC142Q17RM4 750 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 GOLGA7BQ2TAP0 167 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 C11orf63Q6NUN7 778 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 FAM43BQ6ZT52 329 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CPXM1Q96SM3 734 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SDCBP2Q9H190 292 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 DDX20Q9UHI6 824 aaKnown RBP14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SIX4Q9UIU6 781 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 MAP2K2P36507 400 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 ZDHHC14Q8IZN3 488 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 NDRG1Q92597 394 aaKnown RBP14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 ARHGEF2Q92974 986 aaKnown RBP14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CALR3Q96L12 384 aaKnown RBP14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 HERPUD2Q9BSE4 406 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SPC25Q9HBM1 224 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TMBIM4Q9HC24 238 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 IP6K2Q9UHH9 426 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SPRED3Q2MJR0 410 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SH3PXD2AQ5TCZ1 1133 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 CCDC89Q8N998 374 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TMEM176AQ96HP8 235 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 RPS6KC1Q96S38 1066 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TMEM121Q9BTD3 319 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 TSPAN16Q9UKR8 245 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 GRIN2DO15399 1336 aa14.17□□□□□ -0.14
TNFRSF8-201ENST00000263932 SKAP2O75563 359 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 MICAL2O94851 1124 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 GPS1Q13098 491 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 MTMR3Q13615 1198 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 C15orf39Q6ZRI6 1047 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ANKRD23Q86SG2 305 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 VSIG1Q86XK7 387 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CCDC197Q8NCU1 140 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 L3MBTL1Q9Y468 752 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ZC3H4Q9UPT8 1303 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 H7C0C1 242 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CSPG5O95196 566 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 IL18RAPO95256 599 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CCDC130P13994 396 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ATP5OP48047 213 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 NRLP54845 237 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 FSCN1Q16658 493 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 HADHQ16836 314 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 IQSEC1Q6DN90 963 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 TRIM72Q6ZMU5 477 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 RSAD2Q8WXG1 361 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 NT5C1AQ9BXI3 368 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ZFYVE28Q9HCC9 887 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ADGRA2Q96PE1 1338 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 E5RJQ4 531 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CST8O60676 142 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 BANF1O75531 89 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 EIF4BP23588 611 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 PSEN2P49810 448 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 AP3M2P53677 418 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CDH6P55285 790 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 BASP1P80723 227 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 CRHR2Q13324 411 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 MON1BQ7L1V2 547 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 TMC3Q7Z5M5 1100 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 BEST2Q8NFU1 509 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 PIK3R5Q8WYR1 880 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 MRPL45Q9BRJ2 306 aaKnown RBP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 STYXL1Q9Y6J8 313 aa14.16□□□□□ -0.14
TNFRSF8-201ENST00000263932 ZNF646O15015 1829 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 PEX19P40855 299 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 PEX5P50542 639 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 CENPCQ03188 943 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 ADCY2Q08462 1091 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 TRIM32Q13049 653 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 DCTN4Q9UJW0 460 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 TRIM33Q9UPN9 1127 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 CASTOR2A6NHX0 329 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 THPOP40225 353 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 ASPAP45381 313 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 ITGA8P53708 1063 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 ITIH3Q06033 890 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 ZNF677Q86XU0 584 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 CCDC63Q8NA47 563 aa14.15□□□□□ -0.14
TNFRSF8-201ENST00000263932 TMEM40Q8WWA1 233 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms