RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SRGAP2BP0DMP2 458 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PIK3CAP42336 1068 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 TRPC1P48995 793 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 ATXN3P54252 364 aaPredicted RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 TUBA4AP68366 448 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 COG2Q14746 738 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 NADK2Q4G0N4 442 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 H2AFVQ71UI9 128 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 GALNT6Q8NCL4 622 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 HELQQ8TDG4 1101 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 CCDC28BQ9BUN5 200 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 APOL6Q9BWW8 343 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 ARMCX1Q9P291 453 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 ARHGAP20Q9P2F6 1191 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 I3L4J1 428 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 RNASEH1O60930 286 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 SEC24DO94855 1032 aaPredicted RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 KITP10721 976 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 MAP4P27816 1152 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 STT3AP46977 705 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PPP4CP60510 307 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 OCA2Q04671 838 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 HIC1Q14526 733 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 C15orf59Q2T9L4 293 aaPredicted RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 ANO4Q32M45 955 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 WDR72Q3MJ13 1102 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 KIAA1755Q5JYT7 1200 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 FAM117BQ6P1L5 589 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 DNAAF5Q86Y56 855 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 DDI1Q8WTU0 396 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 STARD8Q92502 1023 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 EXOC7Q9UPT5 735 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 DMTF1Q9Y222 760 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PFDN6O15212 129 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PABPC4LP0CB38 370 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 CREB1P16220 341 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 GJC1P36383 396 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 LIFRP42702 1097 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 CCNA1P78396 465 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 ZNF200P98182 395 aaPredicted RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 SNAPC2Q13487 334 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 CTTNQ14247 550 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 PTPAQ15257 358 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 MTFR1Q15390 333 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 MAPK11Q15759 364 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 PPP2R5EQ16537 467 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 RNF43Q68DV7 783 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 NEK8Q86SG6 692 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 RAET1EQ8TD07 263 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 GATA6Q92908 595 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 MAGEB18Q96M61 343 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 P2RX7Q99572 595 aaKnown RBP8.74□□□□□ -1.01
LDB3-201ENST00000263066 GLT8D2Q9H1C3 349 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 LAMB2P55268 1798 aa8.74□□□□□ -1.01
LDB3-201ENST00000263066 LAMA3Q16787 3333 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 FAM47DPA6NHR8 397 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ZBTB5O15062 677 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 DDAH1O94760 285 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 CCDC130P13994 396 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 IFNAR1P17181 557 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 VCLP18206 1134 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 PBX1P40424 430 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 BCAP31P51572 246 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 CDC16Q13042 620 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 RSPH3Q86UC2 560 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 TTC39CQ8N584 583 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 ERP44Q9BS26 406 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ZNF577Q9BSK1 485 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 SHCBP1LQ9BZQ2 653 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 HOXC10Q9NYD6 342 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 RSL24D1Q9UHA3 163 aaKnown RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 ARHGAP26Q9UNA1 814 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 PXDNLA1KZ92 1463 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 NFIBO00712 420 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 DAB1O75553 588 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 CYP1A1P04798 512 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 EEF1B2P24534 225 aaKnown RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 SERPINB1P30740 379 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 GSSP48637 474 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ATN1P54259 1190 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 TPTEP56180 551 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ZNF543Q08ER8 600 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 NFX1Q12986 1120 aaKnown RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 HERC4Q5GLZ8 1057 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 TUBA3EQ6PEY2 450 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ACAD11Q709F0 780 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 HAPLN3Q96S86 360 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 RNPEPQ9H4A4 650 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 VTA1Q9NP79 307 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 FBXO2Q9UK22 296 aaPredicted RBP8.73□□□□□ -1.01
LDB3-201ENST00000263066 SNTNA6NMZ2 147 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 CFAP99D6REC4 459 aa8.73□□□□□ -1.01
LDB3-201ENST00000263066 H3BSA7 217 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms