RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 FAM161BQ96MY7 647 aa13.89□□□□□ -0.19
PGBD1-201ENST00000259883 MANSC1Q9H8J5 431 aa13.89□□□□□ -0.19
PGBD1-201ENST00000259883 JPH1Q9HDC5 661 aaPredicted RBP13.89□□□□□ -0.19
PGBD1-201ENST00000259883 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
PGBD1-201ENST00000259883 MAGED2Q9UNF1 606 aaPredicted RBP13.89□□□□□ -0.19
PGBD1-201ENST00000259883 STARD13Q9Y3M8 1113 aa13.89□□□□□ -0.19
PGBD1-201ENST00000259883 H3BRJ5 948 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 F7P08709 466 aaPredicted RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ELK3P41970 407 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 SLC8A3P57103 927 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TRPC3Q13507 836 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TRIM11Q96F44 468 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RBM41Q96IZ5 413 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 FAM81BQ96LP2 452 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TTC1Q99614 292 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TMEM120AQ9BXJ8 343 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 CADM1Q9BY67 442 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 LRMDAQ9H2I8 198 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 SCINQ9Y6U3 715 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 WASF2Q9Y6W5 498 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 AHDC1Q5TGY3 1603 aaPredicted RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 MEI4A8MW99 385 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 MYL2P10916 166 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ESRRAP11474 423 aaPredicted RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RPL22P35268 128 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 HMGCS2P54868 508 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 PTK7Q13308 1070 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TFDP3Q5H9I0 405 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RNASEH2BQ5TBB1 312 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RNF220Q5VTB9 566 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ANO7Q6IWH7 933 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RSBN1LQ6PCB5 846 aaPredicted RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RCOR2Q8IZ40 523 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 DENND1AQ8TEH3 1009 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 DNAJC9Q8WXX5 260 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 CPT1BQ92523 772 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 PPARGC1AQ9UBK2 798 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 CNTNAP1P78357 1384 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 hCG_1818297A0A087WSY0 165 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 H7C0C1 242 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 UGT1A9O60656 530 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 MUTP22033 750 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 ATP5OP48047 213 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 YARSP54577 528 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 PSMC1P62191 440 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 THOC5Q13769 683 aaKnown RBP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 DENND1BQ6P3S1 775 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 TRIM50Q86XT4 487 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 AGGF1Q8N302 714 aaeCLIP13.88□□□□□ -0.19
PGBD1-201ENST00000259883 STMN2Q93045 179 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 GRAMD1AQ96CP6 724 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 UGT1A7Q9HAW7 530 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 UGT1A10Q9HAW8 530 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 UGT1A8Q9HAW9 530 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 CISHQ9NSE2 258 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 RABGEF1Q9UJ41 708 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 MAD1L1Q9Y6D9 718 aa13.88□□□□□ -0.19
PGBD1-201ENST00000259883 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 E5RJQ4 531 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 INHBAP08476 426 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 POLE2P56282 527 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 ARL4CP56559 192 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 PLEKHA7Q6IQ23 1121 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 DARS2Q6PI48 645 aaKnown RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 SHKBP1Q8TBC3 707 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 RILPQ96NA2 401 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 LINGO3P0C6S8 592 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 RBP3P10745 1247 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 GMPRP36959 345 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 ALDH18A1P54886 795 aaKnown RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 EIF3EP60228 445 aaKnown RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 SP2Q02086 613 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 TCEAL1Q15170 157 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 LMNTD2Q8IXW0 634 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 MAB21L3Q8N8X9 362 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 ARMC2Q8NEN0 867 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 SYT15Q9BQS2 421 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 WDR83Q9BRX9 315 aaKnown RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 ASCC2Q9H1I8 757 aaPredicted RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 NMRK1Q9NWW6 199 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 KANSL3Q9P2N6 904 aa13.87□□□□□ -0.19
PGBD1-201ENST00000259883 SMG5Q9UPR3 1016 aaKnown RBP13.87□□□□□ -0.19
PGBD1-201ENST00000259883 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.86□□□□□ -0.19
PGBD1-201ENST00000259883 TMEM191CA6NGB0 347 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms