RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GLIS3Q8NEA6 775 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 USP13Q92995 863 aaPredicted RBP17.04■□□□□ 0.32
ERCC1-201ENST00000013807 ZNF396Q96N95 335 aaPredicted RBP17.04■□□□□ 0.32
ERCC1-201ENST00000013807 C7orf25Q9BPX7 421 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 PI4K2AQ9BTU6 479 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 GTF3C4Q9UKN8 822 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 KIAA1549LQ6ZVL6 1849 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 PTPRJQ12913 1337 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 TRDMT1O14717 391 aaKnown RBP17.03■□□□□ 0.32
ERCC1-201ENST00000013807 TGFB1I1O43294 461 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 LRP3O75074 770 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 TADA3O75528 432 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 TNK2Q07912 1038 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 BFSP1Q12934 665 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 MYO1EQ12965 1108 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 RUNX3Q13761 415 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 LAIR1Q6GTX8 287 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 WDR49Q8IV35 697 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 MAB21L3Q8N8X9 362 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 IQUBQ8NA54 791 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 OR5B17Q8NGF7 314 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 MRPS31Q92665 395 aaKnown RBP17.03■□□□□ 0.32
ERCC1-201ENST00000013807 CHFRQ96EP1 664 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 ANKRD36BP1Q96IX9 119 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 HPS4Q9NQG7 708 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 RBM12Q9NTZ6 932 aaKnown RBP17.03■□□□□ 0.32
ERCC1-201ENST00000013807 CCL26Q9Y258 94 aa17.03■□□□□ 0.32
ERCC1-201ENST00000013807 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 KRT19P08727 400 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 TCF3P15923 654 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 ACAT1P24752 427 aaKnown RBP17.02■□□□□ 0.32
ERCC1-201ENST00000013807 CDR1P51861 262 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 PON2Q15165 354 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 DDR2Q16832 855 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 TMEM196Q5HYL7 178 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 TXNDC8Q6A555 127 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 SHC4Q6S5L8 630 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 LONP2Q86WA8 852 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 CBWD2Q8IUF1 395 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 ADGRF2Q8IZF7 708 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 HPS3Q969F9 1004 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 HPDLQ96IR7 371 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 SMG9Q9H0W8 520 aaKnown RBP17.02■□□□□ 0.32
ERCC1-201ENST00000013807 HSPBP1Q9NZL4 362 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
ERCC1-201ENST00000013807 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
ERCC1-201ENST00000013807 UBE4BO95155 1302 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 CCDC163A0A0D9SF12 145 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 OTOL1A6NHN0 477 aaPredicted RBP17.01■□□□□ 0.31
ERCC1-201ENST00000013807 HRO43593 1189 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 TNNC2P02585 160 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 PFKLP17858 780 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 GPR15P49685 360 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
ERCC1-201ENST00000013807 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 Q6ZS52 159 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 DGLUCYQ7Z3D6 616 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 KIAA1958Q8N8K9 716 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 RIN3Q8TB24 985 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 SPATA17Q96L03 361 aa17.01■□□□□ 0.31
ERCC1-201ENST00000013807 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
ERCC1-201ENST00000013807 CNOT1A5YKK6 2376 aaKnown RBP17.01■□□□□ 0.31
ERCC1-201ENST00000013807 MYOFQ9NZM1 2061 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 TACC1O75410 805 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 STAU1O95793 577 aaKnown RBP17■□□□□ 0.31
ERCC1-201ENST00000013807 RETP07949 1114 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 WARSP23381 471 aaKnown RBP17■□□□□ 0.31
ERCC1-201ENST00000013807 LMO2P25791 158 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 AMPD2Q01433 879 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 LMNB2Q03252 620 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 PSMD6Q15008 389 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 PDGFRLQ15198 375 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 SNRNP35Q16560 246 aaKnown RBP17■□□□□ 0.31
ERCC1-201ENST00000013807 RSPO4Q2I0M5 234 aaPredicted RBP17■□□□□ 0.31
ERCC1-201ENST00000013807 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 SDHAF4Q5VUM1 108 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 C4orf50Q6ZRC1 276 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 UNC13DQ70J99 1090 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 SPATA2LQ8IUW3 424 aaPredicted RBP17■□□□□ 0.31
ERCC1-201ENST00000013807 C12orf56Q8IXR9 622 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 TTC8Q8TAM2 541 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 TMEM174Q8WUU8 243 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 SCFD1Q8WVM8 642 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 AGPAT3Q9NRZ7 376 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 GCNT4Q9P109 453 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 GMEB2Q9UKD1 530 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 RAB23Q9ULC3 237 aa17■□□□□ 0.31
ERCC1-201ENST00000013807 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms