RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ptk6Q64434 451 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Trpv6Q91WD2 767 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 SncaipQ99ME3 962 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Txndc12Q9CQU0 170 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tspan17Q9D7W4 270 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ccdc22Q9JIG7 627 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Zfp612A0A1D5RMC2 672 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ssxb9A2BI93 185 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dhx15O35286 795 aaKnown RBP10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PrlP06879 226 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mks1Q5SW45 561 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slitrk1Q810C1 696 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Creb3l2Q8BH52 521 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Phactr3Q8BYK5 558 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Prpsap2Q8R574 369 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 AuhQ9JLZ3 314 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nup188Q6ZQH8 1759 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 C4bP01029 1738 aa10.17□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp8b4A2ANX3 1194 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Sh2d4bA6X942 431 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm44503E9PYU5 387 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Oog1E9Q5G7 496 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 TazI7HJS2 263 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Krt10P02535 570 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Col9a2Q07643 688 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Insm1Q63ZV0 521 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ahcyl2Q68FL4 613 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Hmgb4Q6P8W9 181 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ip6k2Q80V72 448 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ppp1r12bQ8BG95 976 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Frmd4aQ8BIE6 1020 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dars2Q8BIP0 653 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 DnerQ8JZM4 737 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rpp40Q8R1F9 363 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Agap3Q8VHH5 910 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Csde1Q91W50 798 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lpin3Q99PI4 848 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 1700129C05RikQ9CQ77 218 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mageb3Q9D2H4 330 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dkc1Q9ESX5 509 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slc8a3S4R2P9 928 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rbbp6P97868 1790 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gcnt4E9Q649 455 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slc1a2P43006 572 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp9bP98195 1146 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ptgs2Q05769 604 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Togaram2Q3TYG6 1002 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nt5c2Q3V1L4 560 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm13103Q4VAD2 491 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tcf12Q61286 706 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fam49aQ8BHZ0 323 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 CrygnQ8VHL5 183 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 4930519G04RikQ9CPT7 205 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Trmt10bQ9D075 318 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 DmgdhQ9DBT9 869 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Sh2d3cQ9QZS8 854 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Myh14Q6URW6 2000 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 SrcapA0A087WQ44 3271 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Col11a2Q64739 1736 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fam171a2A2A699 822 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ttc7bE9Q6P5 843 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Wnt7bP28047 349 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Stmn1P54227 149 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cdo1P60334 200 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 SnrpfP62307 86 aaKnown RBP10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Znf112Q0VAW7 879 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fdxacb1Q3UY23 622 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm10392Q3V3I3 114 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp4aQ64436 1033 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ankrd6Q69ZU8 712 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Kcnk18Q6VV64 394 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rccd1Q8BTU7 377 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PlvapQ91VC4 438 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Strn3Q9ERG2 796 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp6v1g2Q9WTT4 118 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nme3Q9WV85 169 aa10.16□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm29554A0A087WNW4 188 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 NfiaQ02780 532 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pi4k2aQ2TBE6 479 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Prkaa1Q5EG47 559 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dcaf15Q6PFH3 600 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Zfyve28Q6ZPK7 905 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Trpm4Q7TN37 1213 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Glra2Q7TNC8 452 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Vmn1r64Q8R2B8 320 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 FtcdQ91XD4 541 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp6v1b1Q91YH6 513 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Bzw1Q9CQC6 419 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rassf7Q9DD19 359 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pds5aQ6A026 1332 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Zc3h7aE9PWW6 970 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Birc5O70201 140 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ces1cP23953 554 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 DesP31001 469 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PtpreP49446 699 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Kpnb1P70168 876 aaKnown RBP10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Phactr1Q2M3X8 580 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lipo3Q3UT41 399 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Znf219Q6IQX8 726 aa10.15□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Acap2Q6ZQK5 770 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms