RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W MDM10P18409 493 aa3.06□□□□□ -1.92
SWI1YPL016W BET2P20133 325 aa3.06□□□□□ -1.92
SWI1YPL016W RFA3P26755 122 aaKnown RBP3.06□□□□□ -1.92
SWI1YPL016W MRPL1Q04599 285 aa3.06□□□□□ -1.92
SWI1YPL016W YPR114WQ06107 315 aa3.06□□□□□ -1.92
SWI1YPL016W FMP49A0A023PZB3 126 aa3.06□□□□□ -1.92
SWI1YPL016W RPS14AP06367 137 aaKnown RBP3.06□□□□□ -1.92
SWI1YPL016W POX1P13711 748 aa3.06□□□□□ -1.92
SWI1YPL016W VMA11P32842 164 aa3.06□□□□□ -1.92
SWI1YPL016W MRS1P07266 363 aa3.06□□□□□ -1.92
SWI1YPL016W MDH2P22133 377 aa3.06□□□□□ -1.92
SWI1YPL016W FUN19P28003 413 aaPredicted RBP3.06□□□□□ -1.92
SWI1YPL016W MSL1P40567 111 aaPredicted RBP3.06□□□□□ -1.92
SWI1YPL016W UBC7Q02159 165 aa3.06□□□□□ -1.92
SWI1YPL016W YDL007C-AQ2V2Q0 85 aa3.06□□□□□ -1.92
SWI1YPL016W CTK2P46962 323 aa3.05□□□□□ -1.92
SWI1YPL016W MZM1Q03429 123 aaPredicted RBP3.05□□□□□ -1.92
SWI1YPL016W YMR090WQ04304 227 aaKnown RBP3.05□□□□□ -1.92
SWI1YPL016W PRP11Q07350 266 aaPredicted RBP3.05□□□□□ -1.92
SWI1YPL016W YLR363W-AQ3E747 85 aa3.05□□□□□ -1.92
SWI1YPL016W FZF1P32805 299 aa3.05□□□□□ -1.92
SWI1YPL016W MRPS5P33759 307 aa3.05□□□□□ -1.92
SWI1YPL016W YBL059WP34224 193 aa3.05□□□□□ -1.92
SWI1YPL016W YBL081WP38180 368 aaKnown RBP3.05□□□□□ -1.92
SWI1YPL016W BAT2P47176 376 aaKnown RBP3.05□□□□□ -1.92
SWI1YPL016W YNR064CP53750 290 aa3.05□□□□□ -1.92
SWI1YPL016W POP3P53833 195 aaPredicted RBP3.05□□□□□ -1.92
SWI1YPL016W RFM1Q12192 310 aa3.05□□□□□ -1.92
SWI1YPL016W YDR246W-AQ3E763 66 aa3.05□□□□□ -1.92
SWI1YPL016W YDR034W-BQ6Q5X2 51 aa3.05□□□□□ -1.92
SWI1YPL016W SEN1Q00416 2231 aaKnown RBP3.05□□□□□ -1.92
SWI1YPL016W ANB1P19211 157 aa3.05□□□□□ -1.92
SWI1YPL016W ERV1P27882 189 aa3.05□□□□□ -1.92
SWI1YPL016W SDP1P40479 209 aa3.05□□□□□ -1.92
SWI1YPL016W CDC1P40986 491 aa3.05□□□□□ -1.92
SWI1YPL016W MIC27P50945 234 aa3.05□□□□□ -1.92
SWI1YPL016W SUT1P53032 299 aaKnown RBP3.05□□□□□ -1.92
SWI1YPL016W PIS1P06197 220 aaKnown RBP3.04□□□□□ -1.92
SWI1YPL016W KRE1P17260 313 aa3.04□□□□□ -1.92
SWI1YPL016W YMR007WQ03675 126 aa3.04□□□□□ -1.92
SWI1YPL016W TFB5Q3E7C1 72 aaPredicted RBP3.04□□□□□ -1.92
SWI1YPL016W CDC26P14724 124 aa3.04□□□□□ -1.92
SWI1YPL016W IRC22P40006 225 aa3.04□□□□□ -1.92
SWI1YPL016W CUP9P41817 306 aa3.04□□□□□ -1.92
SWI1YPL016W DSK2P48510 373 aa3.04□□□□□ -1.92
SWI1YPL016W SME1Q12330 94 aaPredicted RBP3.04□□□□□ -1.92
SWI1YPL016W COX9P07255 59 aa3.04□□□□□ -1.92
SWI1YPL016W YOR268CQ08734 132 aa3.04□□□□□ -1.92
SWI1YPL016W YCR085WP25650 117 aa3.03□□□□□ -1.92
SWI1YPL016W SPC29P33419 253 aa3.03□□□□□ -1.92
SWI1YPL016W ANS1P38832 159 aa3.03□□□□□ -1.92
SWI1YPL016W DAP1Q12091 152 aa3.03□□□□□ -1.92
SWI1YPL016W KSH1Q8TGJ3 72 aa3.03□□□□□ -1.92
SWI1YPL016W YCR006CP25350 157 aa3.03□□□□□ -1.92
SWI1YPL016W SRP21P32342 167 aa3.03□□□□□ -1.92
SWI1YPL016W MBB1P39534 108 aa3.03□□□□□ -1.92
SWI1YPL016W YLR296WQ05898 108 aa3.03□□□□□ -1.92
SWI1YPL016W IGO2Q9P305 131 aa3.03□□□□□ -1.92
SWI1YPL016W SMP1P38128 452 aa3.03□□□□□ -1.92
SWI1YPL016W YLR042CQ07990 161 aa3.03□□□□□ -1.92
SWI1YPL016W RPS13P05756 151 aaKnown RBP3.02□□□□□ -1.93
SWI1YPL016W VMA3P25515 160 aa3.02□□□□□ -1.93
SWI1YPL016W PPA2P28239 310 aa3.02□□□□□ -1.93
SWI1YPL016W RPA12P32529 125 aaKnown RBP3.02□□□□□ -1.93
SWI1YPL016W SCD6P45978 349 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93 RIP-Chip
SWI1YPL016W YHM2Q04013 314 aa3.02□□□□□ -1.93
SWI1YPL016W RPC11Q04307 110 aaPredicted RBP3.02□□□□□ -1.93
SWI1YPL016W YOR387CQ08910 206 aa3.02□□□□□ -1.93
SWI1YPL016W YKL183C-AQ3E765 70 aa3.02□□□□□ -1.93
SWI1YPL016W YBR292CP38357 123 aa3.02□□□□□ -1.93
SWI1YPL016W YJR096WP47137 282 aa3.02□□□□□ -1.93
SWI1YPL016W YTH1Q06102 208 aaPredicted RBP3.02□□□□□ -1.93
SWI1YPL016W YOR292CQ08743 309 aa3.02□□□□□ -1.93
SWI1YPL016W YDR029WQ12111 104 aa3.02□□□□□ -1.93
SWI1YPL016W ENV10Q99382 181 aa3.02□□□□□ -1.93
SWI1YPL016W YKR032WP36127 104 aa3.02□□□□□ -1.93
SWI1YPL016W IML3P38265 245 aa3.02□□□□□ -1.93
SWI1YPL016W TRI1Q05024 226 aa3.02□□□□□ -1.93
SWI1YPL016W RXT3Q07458 294 aa3.02□□□□□ -1.93
SWI1YPL016W FIT3Q08907 204 aa3.01□□□□□ -1.93
SWI1YPL016W YDL180WQ12301 547 aa3.01□□□□□ -1.93
SWI1YPL016W YPS3Q12303 508 aa3.01□□□□□ -1.93
SWI1YPL016W Q0182Q9ZZW1 134 aa3.01□□□□□ -1.93
SWI1YPL016W YBR121C-AP0C5L4 52 aa3.01□□□□□ -1.93
SWI1YPL016W YAR066WP0CX18 203 aa3.01□□□□□ -1.93
SWI1YPL016W YHR214WP0CX19 203 aa3.01□□□□□ -1.93
SWI1YPL016W DAT1P13483 248 aaKnown RBP3.01□□□□□ -1.93
SWI1YPL016W RFA2P26754 273 aaKnown RBP3.01□□□□□ -1.93
SWI1YPL016W MRPL24P36525 258 aaPredicted RBP3.01□□□□□ -1.93
SWI1YPL016W APQ12P40532 138 aa3.01□□□□□ -1.93
SWI1YPL016W SFT1P43682 97 aa3.01□□□□□ -1.93
SWI1YPL016W GPI19Q04082 140 aa3.01□□□□□ -1.93
SWI1YPL016W TDA8Q6B2U8 126 aa3.01□□□□□ -1.93
SWI1YPL016W STE18P18852 110 aa3.01□□□□□ -1.93
SWI1YPL016W FYV4P38783 130 aaPredicted RBP3.01□□□□□ -1.93
SWI1YPL016W TVP23P38962 199 aa3.01□□□□□ -1.93
SWI1YPL016W SDS23P53172 527 aa3.01□□□□□ -1.93
SWI1YPL016W RPS21BQ3E754 87 aaKnown RBP3.01□□□□□ -1.93
SWI1YPL016W RPL2AP0CX45 254 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W RPL2BP0CX46 254 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms