RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YPS3Q12303 508 aa3.34□□□□□ -1.87
CCS1YMR038C YMR316C-AI2HB70 103 aa3.33□□□□□ -1.88
CCS1YMR038C PIS1P06197 220 aaKnown RBP3.33□□□□□ -1.88
CCS1YMR038C CDC7P06243 507 aa3.33□□□□□ -1.88
CCS1YMR038C YJL197C-AP0C5P0 93 aa3.33□□□□□ -1.88
CCS1YMR038C FCY2P17064 533 aa3.33□□□□□ -1.88
CCS1YMR038C SEC22P22214 214 aa3.33□□□□□ -1.88
CCS1YMR038C YCR001WP25347 104 aa3.33□□□□□ -1.88
CCS1YMR038C UPS2P35200 230 aa3.33□□□□□ -1.88
CCS1YMR038C CSH1P38287 376 aa3.33□□□□□ -1.88
CCS1YMR038C MIG3P39943 394 aa3.33□□□□□ -1.88
CCS1YMR038C YER135CP40082 130 aa3.33□□□□□ -1.88
CCS1YMR038C YPL264CQ08980 353 aa3.33□□□□□ -1.88
CCS1YMR038C COA2Q3E823 68 aa3.33□□□□□ -1.88
CCS1YMR038C PPQ1P32945 549 aa3.32□□□□□ -1.88
CCS1YMR038C VMA22P38784 181 aa3.32□□□□□ -1.88
CCS1YMR038C RTC3P38804 111 aaPredicted RBP3.32□□□□□ -1.88
CCS1YMR038C YJR015WP47090 510 aa3.32□□□□□ -1.88
CCS1YMR038C TPN1P53099 579 aa3.32□□□□□ -1.88
CCS1YMR038C MRPS8Q03799 155 aa3.32□□□□□ -1.88
CCS1YMR038C YOL160WQ08321 113 aa3.32□□□□□ -1.88
CCS1YMR038C AIM45Q12480 344 aaKnown RBP3.32□□□□□ -1.88
CCS1YMR038C YNL146C-AQ3E7Z1 64 aa3.32□□□□□ -1.88
CCS1YMR038C SPS2P08459 502 aa3.31□□□□□ -1.88
CCS1YMR038C RPS25BP0C0T4 108 aaKnown RBP3.31□□□□□ -1.88
CCS1YMR038C SUA5P32579 426 aa3.31□□□□□ -1.88
CCS1YMR038C SHB17P36136 271 aaKnown RBP3.31□□□□□ -1.88
CCS1YMR038C IMP2P46972 177 aa3.31□□□□□ -1.88
CCS1YMR038C PDR17P53844 350 aa3.31□□□□□ -1.88
CCS1YMR038C RPS25AQ3E792 108 aaPredicted RBP3.31□□□□□ -1.88
CCS1YMR038C TFB5Q3E7C1 72 aaPredicted RBP3.31□□□□□ -1.88
CCS1YMR038C NHP6BP11633 99 aaKnown RBP3.3□□□□□ -1.88
CCS1YMR038C ANB1P19211 157 aa3.3□□□□□ -1.88
CCS1YMR038C LSM2P38203 95 aaKnown RBP3.3□□□□□ -1.88
CCS1YMR038C COX14P39103 70 aa3.3□□□□□ -1.88
CCS1YMR038C HST4P53688 370 aa3.3□□□□□ -1.88
CCS1YMR038C UBC7Q02159 165 aa3.3□□□□□ -1.88
CCS1YMR038C YMR090WQ04304 227 aaKnown RBP3.3□□□□□ -1.88
CCS1YMR038C SDH7Q04401 133 aa3.3□□□□□ -1.88
CCS1YMR038C YPR195CQ06594 109 aa3.3□□□□□ -1.88
CCS1YMR038C RRT7Q07829 113 aa3.3□□□□□ -1.88
CCS1YMR038C ZRC1P20107 442 aa3.29□□□□□ -1.88
CCS1YMR038C YCR025CP25352 136 aa3.29□□□□□ -1.88
CCS1YMR038C FPR2P32472 135 aa3.29□□□□□ -1.88
CCS1YMR038C UTP11P34247 250 aaPredicted RBP3.29□□□□□ -1.88
CCS1YMR038C SFT2P38166 215 aa3.29□□□□□ -1.88
CCS1YMR038C RPS11AP0CX47 156 aaKnown RBP3.28□□□□□ -1.88
CCS1YMR038C RPS11BP0CX48 156 aaKnown RBP3.28□□□□□ -1.88
CCS1YMR038C TIR2P33890 251 aa3.28□□□□□ -1.88
CCS1YMR038C MRPL3P36516 390 aa3.28□□□□□ -1.88
CCS1YMR038C YGR269WP40326 108 aa3.28□□□□□ -1.88
CCS1YMR038C YKE4P40544 346 aa3.28□□□□□ -1.88
CCS1YMR038C SNX4P47057 423 aa3.28□□□□□ -1.88
CCS1YMR038C AIM24P47127 394 aa3.28□□□□□ -1.88
CCS1YMR038C SHH3Q04487 196 aa3.28□□□□□ -1.88
CCS1YMR038C VAM10Q08474 114 aa3.28□□□□□ -1.88
CCS1YMR038C ARG80P07249 177 aa3.27□□□□□ -1.89
CCS1YMR038C PUT1P09368 476 aa3.27□□□□□ -1.89
CCS1YMR038C YPC1P38298 316 aa3.27□□□□□ -1.89
CCS1YMR038C YEA6P39953 335 aa3.27□□□□□ -1.89
CCS1YMR038C YNL200CP40165 246 aaKnown RBP3.27□□□□□ -1.89
CCS1YMR038C CDC40P40968 455 aaPredicted RBP3.27□□□□□ -1.89
CCS1YMR038C MCM22P47167 239 aa3.27□□□□□ -1.89
CCS1YMR038C MIC27P50945 234 aa3.27□□□□□ -1.89
CCS1YMR038C LOA1Q06508 300 aa3.27□□□□□ -1.89
CCS1YMR038C CTR3Q06686 241 aa3.27□□□□□ -1.89
CCS1YMR038C YPL162CQ12042 273 aa3.27□□□□□ -1.89
CCS1YMR038C PRR2Q12310 699 aa3.27□□□□□ -1.89
CCS1YMR038C RPL2AP0CX45 254 aaKnown RBP3.26□□□□□ -1.89
CCS1YMR038C RPL2BP0CX46 254 aaKnown RBP3.26□□□□□ -1.89
CCS1YMR038C YBR242WP38331 238 aa3.26□□□□□ -1.89
CCS1YMR038C SLM6P38343 150 aa3.26□□□□□ -1.89
CCS1YMR038C PET100P38958 111 aa3.26□□□□□ -1.89
CCS1YMR038C SWM2P40342 146 aa3.26□□□□□ -1.89
CCS1YMR038C FMP41P53889 259 aaKnown RBP3.26□□□□□ -1.89
CCS1YMR038C YMR082CQ04276 118 aa3.26□□□□□ -1.89
CCS1YMR038C LCL2Q08045 131 aa3.26□□□□□ -1.89
CCS1YMR038C YLR146W-AQ2V2P1 62 aa3.26□□□□□ -1.89
CCS1YMR038C YOL085CQ99345 113 aa3.26□□□□□ -1.89
CCS1YMR038C GCN3P14741 305 aa3.25□□□□□ -1.89
CCS1YMR038C YHR022CP38763 256 aa3.25□□□□□ -1.89
CCS1YMR038C RPL13BP40212 199 aaKnown RBP3.25□□□□□ -1.89
CCS1YMR038C BNS1P50084 137 aa3.25□□□□□ -1.89
CCS1YMR038C ORM1P53224 222 aa3.25□□□□□ -1.89
CCS1YMR038C YMR007WQ03675 126 aa3.25□□□□□ -1.89
CCS1YMR038C YPR063CQ12160 140 aa3.25□□□□□ -1.89
CCS1YMR038C RPL13AQ12690 199 aaPredicted RBP3.25□□□□□ -1.89
CCS1YMR038C YCR075W-AQ3E830 75 aa3.25□□□□□ -1.89
CCS1YMR038C YHR213W-AQ8TGT4 77 aa3.25□□□□□ -1.89
CCS1YMR038C DDI2P0CH63 225 aa3.24□□□□□ -1.89
CCS1YMR038C DDI3P0CH64 225 aa3.24□□□□□ -1.89
CCS1YMR038C DER1P38307 211 aa3.24□□□□□ -1.89
CCS1YMR038C CCW12Q12127 133 aa3.24□□□□□ -1.89
CCS1YMR038C RPL12AP0CX53 165 aaKnown RBP3.23□□□□□ -1.89
CCS1YMR038C RPL12BP0CX54 165 aa3.23□□□□□ -1.89
CCS1YMR038C TAL1P15019 335 aaKnown RBP3.23□□□□□ -1.89
CCS1YMR038C HUA1P40325 198 aa3.23□□□□□ -1.89
CCS1YMR038C YJR111CP47148 283 aaKnown RBP3.23□□□□□ -1.89
CCS1YMR038C DID2P69771 204 aa3.23□□□□□ -1.89
CCS1YMR038C CDC50P25656 391 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms