RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C UTP11P34247 250 aaPredicted RBP2.01□□□□□ -2.09
PML39YML107C YHR180WP38868 163 aa2.01□□□□□ -2.09
PML39YML107C RFC2P40348 353 aa2.01□□□□□ -2.09
PML39YML107C FIP1P45976 327 aa2.01□□□□□ -2.09
PML39YML107C COF1Q03048 143 aaKnown RBP2.01□□□□□ -2.09
PML39YML107C YDR278CQ05612 105 aa2.01□□□□□ -2.09
PML39YML107C LDB18Q07887 179 aa2.01□□□□□ -2.09
PML39YML107C DGK1Q12382 290 aa2.01□□□□□ -2.09
PML39YML107C YDR524C-BQ3E6R4 66 aa2.01□□□□□ -2.09
PML39YML107C KIN28P06242 306 aa2□□□□□ -2.09
PML39YML107C ADK1P07170 222 aaKnown RBP2□□□□□ -2.09
PML39YML107C YLR156WP0CE96 114 aa2□□□□□ -2.09
PML39YML107C YLR159WP0CE97 114 aa2□□□□□ -2.09
PML39YML107C YLR161WP0CE98 114 aa2□□□□□ -2.09
PML39YML107C PBI2P0CT04 75 aaKnown RBP2□□□□□ -2.09
PML39YML107C RPL30P14120 105 aaKnown RBP2□□□□□ -2.09
PML39YML107C RPB3P16370 318 aaKnown RBP2□□□□□ -2.09
PML39YML107C ATP15P21306 62 aa2□□□□□ -2.09
PML39YML107C STP22P25604 385 aa2□□□□□ -2.09
PML39YML107C SPT14P32363 452 aa2□□□□□ -2.09
PML39YML107C RPS20P38701 121 aaKnown RBP2□□□□□ -2.09
PML39YML107C SKI6P46948 246 aaPredicted RBP2□□□□□ -2.09
PML39YML107C TDA4P47153 279 aa2□□□□□ -2.09
PML39YML107C TTI2P47168 421 aa2□□□□□ -2.09
PML39YML107C CCC1P47818 322 aa2□□□□□ -2.09
PML39YML107C HHT1P61830 136 aa2□□□□□ -2.09
PML39YML107C PLP1Q04004 230 aa2□□□□□ -2.09
PML39YML107C FYV12Q08559 129 aa2□□□□□ -2.09
PML39YML107C TSC3Q3E790 80 aa2□□□□□ -2.09
PML39YML107C GSP1P32835 219 aaKnown RBP1.99□□□□□ -2.09
PML39YML107C GSP2P32836 220 aaKnown RBP1.99□□□□□ -2.09
PML39YML107C YRA2P36036 203 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
PML39YML107C POP4P38336 279 aa1.99□□□□□ -2.09
PML39YML107C PGD1P40356 397 aa1.99□□□□□ -2.09
PML39YML107C RPL33BP41056 107 aaKnown RBP1.99□□□□□ -2.09
PML39YML107C VPS71Q03433 280 aa1.99□□□□□ -2.09
PML39YML107C YOL014WQ08110 124 aa1.99□□□□□ -2.09
PML39YML107C YLR099W-AQ3E798 87 aa1.99□□□□□ -2.09
PML39YML107C REP2P03872 296 aa1.98□□□□□ -2.09
PML39YML107C DDI2P0CH63 225 aa1.98□□□□□ -2.09
PML39YML107C DDI3P0CH64 225 aa1.98□□□□□ -2.09
PML39YML107C MRP49P32388 137 aa1.98□□□□□ -2.09
PML39YML107C HYM1P32464 399 aa1.98□□□□□ -2.09
PML39YML107C PAN3P36102 679 aaPredicted RBP1.98□□□□□ -2.09
PML39YML107C YKR070WP36151 352 aaKnown RBP1.98□□□□□ -2.09
PML39YML107C FYV4P38783 130 aaPredicted RBP1.98□□□□□ -2.09
PML39YML107C YPL073CP40323 161 aa1.98□□□□□ -2.09
PML39YML107C DLS1P40366 167 aa1.98□□□□□ -2.09
PML39YML107C YJL218WP40892 196 aaKnown RBP1.98□□□□□ -2.09
PML39YML107C SER2P42941 309 aa1.98□□□□□ -2.09
PML39YML107C YFL019CP43576 117 aa1.98□□□□□ -2.09
PML39YML107C ERJ5P43613 295 aaPredicted RBP1.98□□□□□ -2.09
PML39YML107C ARL3Q02804 198 aa1.98□□□□□ -2.09
PML39YML107C DIG2Q03373 323 aaKnown RBP1.98□□□□□ -2.09
PML39YML107C PSF1Q12488 208 aa1.98□□□□□ -2.09
PML39YML107C SLO1Q3E784 85 aa1.98□□□□□ -2.09
PML39YML107C MSB2P32334 1306 aa1.97□□□□□ -2.09
PML39YML107C NMT1P14743 455 aa1.97□□□□□ -2.09
PML39YML107C YHR140WP38842 239 aa1.97□□□□□ -2.09
PML39YML107C YER181CP40097 107 aa1.97□□□□□ -2.09
PML39YML107C GLR1P41921 483 aaKnown RBP1.97□□□□□ -2.09
PML39YML107C AIF1P52923 378 aa1.97□□□□□ -2.09
PML39YML107C YNR062CP53748 327 aa1.97□□□□□ -2.09
PML39YML107C BUD25P85052 153 aa1.97□□□□□ -2.09
PML39YML107C SDH7Q04401 133 aa1.97□□□□□ -2.09
PML39YML107C CNL1Q06333 122 aa1.97□□□□□ -2.09
PML39YML107C YOR289WQ12012 251 aaPredicted RBP1.97□□□□□ -2.09
PML39YML107C YBL010CP32788 280 aa1.96□□□□□ -2.1
PML39YML107C PTC1P35182 281 aa1.96□□□□□ -2.1
PML39YML107C SHE2P36068 246 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
PML39YML107C PRP11Q07350 266 aaPredicted RBP1.96□□□□□ -2.1
PML39YML107C YPR014CQ6B0W2 109 aa1.96□□□□□ -2.1
PML39YML107C YML100W-AQ8TGT0 57 aa1.96□□□□□ -2.1
PML39YML107C BRR2P32639 2163 aaKnown RBP1.95□□□□□ -2.1
PML39YML107C FMP49A0A023PZB3 126 aa1.95□□□□□ -2.1
PML39YML107C ATP5P09457 212 aa1.95□□□□□ -2.1
PML39YML107C YOL162WP0CF19 215 aa1.95□□□□□ -2.1
PML39YML107C BET1P22804 142 aa1.95□□□□□ -2.1
PML39YML107C BUD23P25627 275 aaPredicted RBP1.95□□□□□ -2.1
PML39YML107C TFC1P32367 649 aa1.95□□□□□ -2.1
PML39YML107C SHB17P36136 271 aaKnown RBP1.95□□□□□ -2.1
PML39YML107C VMA7P39111 118 aa1.95□□□□□ -2.1
PML39YML107C MOB1P40484 314 aa1.95□□□□□ -2.1
PML39YML107C TIR3P40552 269 aa1.95□□□□□ -2.1
PML39YML107C SFT1P43682 97 aa1.95□□□□□ -2.1
PML39YML107C YGR039WP53225 103 aa1.95□□□□□ -2.1
PML39YML107C YKR005CQ02203 525 aa1.95□□□□□ -2.1
PML39YML107C YDR391CQ04170 232 aa1.95□□□□□ -2.1
PML39YML107C YPL225WQ08971 146 aaKnown RBP1.95□□□□□ -2.1
PML39YML107C FYV7Q12247 151 aa1.95□□□□□ -2.1
PML39YML107C YIR021W-AQ3E739 70 aa1.95□□□□□ -2.1
PML39YML107C POL2P21951 2222 aaKnown RBP1.94□□□□□ -2.1
PML39YML107C TIM9O74700 87 aa1.94□□□□□ -2.1
PML39YML107C TIR1P10863 254 aa1.94□□□□□ -2.1
PML39YML107C PHO85P17157 305 aa1.94□□□□□ -2.1
PML39YML107C YCL042WP25572 119 aa1.94□□□□□ -2.1
PML39YML107C RPL14AP36105 138 aaKnown RBP1.94□□□□□ -2.1
PML39YML107C SKG1P36169 355 aa1.94□□□□□ -2.1
PML39YML107C MRPL24P36525 258 aaPredicted RBP1.94□□□□□ -2.1
PML39YML107C ETR1P38071 380 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 296.1 ms