RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W VAM10Q08474 114 aa1.01□□□□□ -2.25
SMD2YLR275W CMC4Q3E7A9 73 aa1.01□□□□□ -2.25
SMD2YLR275W YGL041W-AP0C5N3 154 aa1□□□□□ -2.25
SMD2YLR275W FMN1Q03778 218 aa1□□□□□ -2.25
SMD2YLR275W NMA1Q06178 401 aaKnown RBP1□□□□□ -2.25
SMD2YLR275W HSP150P32478 413 aa0.99□□□□□ -2.25
SMD2YLR275W ECM31P38122 312 aa0.99□□□□□ -2.25
SMD2YLR275W YBR027CP38220 110 aa0.99□□□□□ -2.25
SMD2YLR275W FIG1P38224 298 aa0.99□□□□□ -2.25
SMD2YLR275W YER181CP40097 107 aa0.99□□□□□ -2.25
SMD2YLR275W RCF2P53721 224 aa0.99□□□□□ -2.25
SMD2YLR275W FMP49A0A023PZB3 126 aa0.98□□□□□ -2.25
SMD2YLR275W PHO13P19881 312 aa0.98□□□□□ -2.25
SMD2YLR275W TMA23Q03525 211 aa0.98□□□□□ -2.25
SMD2YLR275W RRT7Q07829 113 aa0.98□□□□□ -2.25
SMD2YLR275W RFU1Q08003 200 aa0.98□□□□□ -2.25
SMD2YLR275W YCR001WP25347 104 aa0.97□□□□□ -2.25
SMD2YLR275W SRP21P32342 167 aa0.97□□□□□ -2.25
SMD2YLR275W MRPL24P36525 258 aaPredicted RBP0.97□□□□□ -2.25
SMD2YLR275W YJL218WP40892 196 aaKnown RBP0.97□□□□□ -2.25
SMD2YLR275W ATP19P81451 68 aa0.97□□□□□ -2.25
SMD2YLR275W IRC19Q07843 230 aa0.97□□□□□ -2.25
SMD2YLR275W PET20Q99373 253 aa0.97□□□□□ -2.25
SMD2YLR275W RIF1P29539 1916 aa0.97□□□□□ -2.25
SMD2YLR275W HYP2P23301 157 aaKnown RBP0.96□□□□□ -2.26
SMD2YLR275W IPT1P38954 527 aa0.96□□□□□ -2.26
SMD2YLR275W SMD2Q06217 110 aaKnown RBP0.96□□□□□ -2.26
SMD2YLR275W YOL013W-AP0C272 63 aaPredicted RBP0.94□□□□□ -2.26
SMD2YLR275W ARC19P33204 171 aaKnown RBP0.94□□□□□ -2.26
SMD2YLR275W YPR153WQ06537 140 aa0.94□□□□□ -2.26
SMD2YLR275W DDR48P18899 430 aaKnown RBP0.93□□□□□ -2.26
SMD2YLR275W GPI2P46961 280 aa0.93□□□□□ -2.26
SMD2YLR275W YNL122CP53921 115 aaPredicted RBP0.93□□□□□ -2.26
SMD2YLR275W RAV2Q03956 351 aa0.93□□□□□ -2.26
SMD2YLR275W SCS22Q6Q595 175 aa0.93□□□□□ -2.26
SMD2YLR275W ATG8P38182 117 aaRIP-Chip data0.92□□□□□ -2.26not detected
SMD2YLR275W SED1Q01589 338 aa0.92□□□□□ -2.26
SMD2YLR275W EST3Q03096 181 aa0.92□□□□□ -2.26
SMD2YLR275W GPI11Q06636 219 aa0.92□□□□□ -2.26
SMD2YLR275W PET54P10834 293 aa0.91□□□□□ -2.26
SMD2YLR275W PKR1Q03880 122 aaKnown RBP0.91□□□□□ -2.26
SMD2YLR275W NHP6AP11632 93 aaKnown RBP0.9□□□□□ -2.27
SMD2YLR275W HSP12P22943 109 aaKnown RBP0.9□□□□□ -2.27
SMD2YLR275W YOR072WQ08486 104 aa0.9□□□□□ -2.27
SMD2YLR275W RPL33AP05744 107 aaKnown RBP0.89□□□□□ -2.27
SMD2YLR275W HAP2P06774 265 aa0.89□□□□□ -2.27
SMD2YLR275W VMA10P48836 114 aaKnown RBP0.89□□□□□ -2.27
SMD2YLR275W YHR213W-BQ8TGK1 99 aa0.89□□□□□ -2.27
SMD2YLR275W HSL1P34244 1518 aa0.89□□□□□ -2.27
SMD2YLR275W ROM2P51862 1356 aaKnown RBP0.88□□□□□ -2.27
SMD2YLR275W IPI1P38803 334 aaPredicted RBP0.88□□□□□ -2.27
SMD2YLR275W MOG1P47123 218 aa0.88□□□□□ -2.27
SMD2YLR275W EFM5P53200 248 aaKnown RBP0.88□□□□□ -2.27
SMD2YLR275W MGR2Q02889 113 aa0.88□□□□□ -2.27
SMD2YLR275W SEN15Q04675 128 aa0.88□□□□□ -2.27
SMD2YLR275W RIB3Q99258 208 aa0.88□□□□□ -2.27
SMD2YLR275W YOR1P53049 1477 aa0.87□□□□□ -2.27
SMD2YLR275W COX5BP00425 151 aa0.87□□□□□ -2.27
SMD2YLR275W RPS22AP0C0W1 130 aaKnown RBP0.87□□□□□ -2.27
SMD2YLR275W HHY1P39982 102 aa0.87□□□□□ -2.27
SMD2YLR275W HUT1Q12520 339 aa0.87□□□□□ -2.27
SMD2YLR275W RPS22BQ3E7Y3 130 aaKnown RBP0.87□□□□□ -2.27
SMD2YLR275W HFA1P32874 2273 aa0.87□□□□□ -2.27
SMD2YLR275W SRL3P36167 246 aa0.86□□□□□ -2.27
SMD2YLR275W YGR201CP42936 225 aa0.86□□□□□ -2.27
SMD2YLR275W UBR1P19812 1950 aa0.85□□□□□ -2.27
SMD2YLR275W RPS1BP23248 255 aaKnown RBP0.85□□□□□ -2.27
SMD2YLR275W FYV5P25585 152 aa0.85□□□□□ -2.27
SMD2YLR275W SUI1P32911 108 aaKnown RBP0.85□□□□□ -2.27
SMD2YLR275W YCL001W-AP87012 153 aa0.85□□□□□ -2.27
SMD2YLR275W IRC21Q04772 201 aa0.85□□□□□ -2.27
SMD2YLR275W MHF1Q3E835 90 aa0.85□□□□□ -2.27
SMD2YLR275W QCR6P00127 147 aa0.84□□□□□ -2.27
SMD2YLR275W YGL014C-AP0C5N1 53 aa0.84□□□□□ -2.27
SMD2YLR275W YJL009WP47078 108 aa0.84□□□□□ -2.27
SMD2YLR275W DIE2P50076 525 aa0.84□□□□□ -2.27
SMD2YLR275W YDR366CP87287 132 aa0.84□□□□□ -2.27
SMD2YLR275W YMR320WQ04897 101 aa0.84□□□□□ -2.27
SMD2YLR275W SOM1Q05676 74 aa0.84□□□□□ -2.27
SMD2YLR275W RAF1Q06891 181 aa0.83□□□□□ -2.28
SMD2YLR275W DDP1Q99321 188 aaKnown RBP0.83□□□□□ -2.28
SMD2YLR275W PHB1P40961 287 aa0.82□□□□□ -2.28
SMD2YLR275W LSM1P47017 172 aaKnown RBP0.82□□□□□ -2.28
SMD2YLR275W SPG1P50088 95 aa0.82□□□□□ -2.28
SMD2YLR275W YNL019CP53975 284 aa0.82□□□□□ -2.28
SMD2YLR275W YMR122CQ03879 124 aa0.82□□□□□ -2.28
SMD2YLR275W CDC39P25655 2108 aaKnown RBP0.82□□□□□ -2.28
SMD2YLR275W YAP3P38749 330 aa0.81□□□□□ -2.28
SMD2YLR275W LSM8P47093 109 aaKnown RBP0.81□□□□□ -2.28
SMD2YLR275W HHO1P53551 258 aa0.81□□□□□ -2.28
SMD2YLR275W NAT5Q08689 176 aa0.81□□□□□ -2.28
SMD2YLR275W LST8P41318 303 aa0.8□□□□□ -2.28
SMD2YLR275W RBL2P48606 106 aaKnown RBP0.8□□□□□ -2.28
SMD2YLR275W COF1Q03048 143 aaKnown RBP0.8□□□□□ -2.28
SMD2YLR275W YOR385WQ08909 290 aa0.8□□□□□ -2.28
SMD2YLR275W ANB1P19211 157 aa0.79□□□□□ -2.28
SMD2YLR275W YGR039WP53225 103 aa0.79□□□□□ -2.28
SMD2YLR275W SPC3Q12133 184 aa0.79□□□□□ -2.28
SMD2YLR275W YHR213WP0CI67 198 aa0.78□□□□□ -2.28
SMD2YLR275W NMT1P14743 455 aa0.78□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms