RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W SNU13P39990 126 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YER188WP40103 239 aa1.77□□□□□ -2.13
SNU114YKL173W YGL262WP53054 175 aa1.77□□□□□ -2.13
SNU114YKL173W SMT3Q12306 101 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W TSC3Q3E790 80 aa1.77□□□□□ -2.13
SNU114YKL173W YEL045CP32616 141 aa1.77□□□□□ -2.13
SNU114YKL173W UTP30P36144 274 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YHR130CP38834 111 aa1.77□□□□□ -2.13
SNU114YKL173W GEP7P53171 287 aa1.77□□□□□ -2.13
SNU114YKL173W SMD1Q02260 146 aaPredicted RBP1.77□□□□□ -2.13
SNU114YKL173W NIP7Q08962 181 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YPL264CQ08980 353 aa1.77□□□□□ -2.13
SNU114YKL173W HUT1Q12520 339 aa1.77□□□□□ -2.13
SNU114YKL173W REP2P03872 296 aa1.77□□□□□ -2.13
SNU114YKL173W CKS1P20486 150 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W HYP2P23301 157 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W CTR2P38865 189 aa1.77□□□□□ -2.13
SNU114YKL173W YJL218WP40892 196 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W YNR062CP53748 327 aa1.77□□□□□ -2.13
SNU114YKL173W YPL162CQ12042 273 aa1.77□□□□□ -2.13
SNU114YKL173W SPC3Q12133 184 aa1.77□□□□□ -2.13
SNU114YKL173W FCY1Q12178 158 aa1.77□□□□□ -2.13
SNU114YKL173W YPR014CQ6B0W2 109 aa1.77□□□□□ -2.13
SNU114YKL173W SGA1P08019 549 aa1.76□□□□□ -2.13
SNU114YKL173W PEX4P29340 183 aa1.76□□□□□ -2.13
SNU114YKL173W GAA1P39012 614 aa1.76□□□□□ -2.13
SNU114YKL173W YAR029WP39549 74 aa1.76□□□□□ -2.13
SNU114YKL173W MPM1P40364 252 aa1.76□□□□□ -2.13
SNU114YKL173W TIM13P53299 105 aa1.76□□□□□ -2.13
SNU114YKL173W SAY1P53324 424 aa1.76□□□□□ -2.13
SNU114YKL173W FCF1Q05498 189 aaPredicted RBP1.76□□□□□ -2.13
SNU114YKL173W FMP27Q06179 2628 aa1.76□□□□□ -2.13
SNU114YKL173W ATP5P09457 212 aa1.76□□□□□ -2.13
SNU114YKL173W TIR1P10863 254 aa1.76□□□□□ -2.13
SNU114YKL173W NSE4P43124 402 aa1.76□□□□□ -2.13
SNU114YKL173W YGL230CP53074 147 aa1.76□□□□□ -2.13
SNU114YKL173W TVP15Q03860 143 aa1.76□□□□□ -2.13
SNU114YKL173W YER189WP40104 122 aa1.75□□□□□ -2.13
SNU114YKL173W SMD3P43321 101 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W BUD25P85052 153 aa1.75□□□□□ -2.13
SNU114YKL173W ELC1Q03071 99 aa1.75□□□□□ -2.13
SNU114YKL173W MCP1Q12106 302 aa1.75□□□□□ -2.13
SNU114YKL173W YFR032C-BQ8TGU2 87 aa1.75□□□□□ -2.13
SNU114YKL173W GCN1P33892 2672 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W YEL009C-AA0A023PZF2 135 aa1.75□□□□□ -2.13
SNU114YKL173W FYV4P38783 130 aaPredicted RBP1.75□□□□□ -2.13
SNU114YKL173W TEM1P38987 245 aa1.75□□□□□ -2.13
SNU114YKL173W YEL075CP39972 122 aa1.75□□□□□ -2.13
SNU114YKL173W YIL059CP40520 121 aa1.75□□□□□ -2.13
SNU114YKL173W CUP9P41817 306 aa1.75□□□□□ -2.13
SNU114YKL173W GPI2P46961 280 aa1.75□□□□□ -2.13
SNU114YKL173W BAT2P47176 376 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W SBH1P52870 82 aa1.75□□□□□ -2.13
SNU114YKL173W CAX4P53223 239 aa1.75□□□□□ -2.13
SNU114YKL173W YMR252CQ04814 134 aa1.75□□□□□ -2.13
SNU114YKL173W SML1Q04964 104 aa1.75□□□□□ -2.13
SNU114YKL173W YOR376W-AQ3E805 51 aa1.75□□□□□ -2.13
SNU114YKL173W DDP1Q99321 188 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W ACC1Q00955 2233 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W ADE6P38972 1358 aaKnown RBP1.75□□□□□ -2.13
SNU114YKL173W NOP1P15646 327 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W RPB3P16370 318 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W SRP21P32342 167 aa1.74□□□□□ -2.13
SNU114YKL173W CCS1P40202 249 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W YIL054WP40524 105 aa1.74□□□□□ -2.13
SNU114YKL173W YCL001W-AP87012 153 aa1.74□□□□□ -2.13
SNU114YKL173W YDR102CQ03864 110 aa1.74□□□□□ -2.13
SNU114YKL173W RAD28Q12021 506 aa1.74□□□□□ -2.13
SNU114YKL173W YLR412C-AQ3E742 68 aa1.74□□□□□ -2.13
SNU114YKL173W DDR48P18899 430 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W HSP12P22943 109 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W LSM2P38203 95 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W HPA3P39979 161 aa1.74□□□□□ -2.13
SNU114YKL173W GTT1P40582 234 aa1.74□□□□□ -2.13
SNU114YKL173W PAM16P42949 149 aa1.74□□□□□ -2.13
SNU114YKL173W YFL019CP43576 117 aa1.74□□□□□ -2.13
SNU114YKL173W ALG9P53868 555 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W LPP1Q04396 274 aa1.74□□□□□ -2.13
SNU114YKL173W UIP4Q08926 304 aa1.74□□□□□ -2.13
SNU114YKL173W BOL1Q3E793 110 aa1.74□□□□□ -2.13
SNU114YKL173W TDA8Q6B2U8 126 aa1.74□□□□□ -2.13
SNU114YKL173W LAA1P39526 2014 aa1.74□□□□□ -2.13
SNU114YKL173W HSP26P15992 214 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SNU114YKL173W MRS4P23500 304 aa1.74□□□□□ -2.13
SNU114YKL173W YBR090CP38253 122 aa1.74□□□□□ -2.13
SNU114YKL173W SPC25P40014 221 aa1.74□□□□□ -2.13
SNU114YKL173W YER134CP40081 178 aa1.74□□□□□ -2.13
SNU114YKL173W TIF34P40217 347 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W PFS2P42841 465 aaKnown RBP1.74□□□□□ -2.13
SNU114YKL173W YMR103CQ04436 120 aa1.74□□□□□ -2.13
SNU114YKL173W PST1Q12355 444 aa1.74□□□□□ -2.13
SNU114YKL173W KTI11Q3E840 82 aa1.74□□□□□ -2.13
SNU114YKL173W AUS1Q08409 1394 aa1.74□□□□□ -2.13
SNU114YKL173W SCM4P32564 187 aa1.73□□□□□ -2.13
SNU114YKL173W UTH1P36135 365 aa1.73□□□□□ -2.13
SNU114YKL173W ECM34P38728 170 aa1.73□□□□□ -2.13
SNU114YKL173W AVT2P39981 480 aa1.73□□□□□ -2.13
SNU114YKL173W YFR045WP43617 309 aa1.73□□□□□ -2.13
SNU114YKL173W YPR174CQ06616 221 aaPredicted RBP1.73□□□□□ -2.13
SNU114YKL173W ATG10Q07879 167 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms