RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W COX17Q12287 69 aa5.33□□□□□ -1.56
GEF1YJR040W YIL102C-AQ2V2P5 75 aa5.33□□□□□ -1.56
GEF1YJR040W ISD11Q6Q560 94 aa5.33□□□□□ -1.56
GEF1YJR040W IRA1P18963 3092 aa5.33□□□□□ -1.56
GEF1YJR040W HMX1P32339 317 aa5.32□□□□□ -1.56
GEF1YJR040W YHR138CP38841 114 aaPredicted RBP5.32□□□□□ -1.56
GEF1YJR040W YCK3P39962 524 aa5.32□□□□□ -1.56
GEF1YJR040W YGR269WP40326 108 aa5.32□□□□□ -1.56
GEF1YJR040W YGL260WP53056 76 aa5.32□□□□□ -1.56
GEF1YJR040W RIM9Q04734 239 aa5.32□□□□□ -1.56
GEF1YJR040W RPS22BQ3E7Y3 130 aaKnown RBP5.32□□□□□ -1.56
GEF1YJR040W QCR9P22289 66 aa5.32□□□□□ -1.56
GEF1YJR040W PHD1P36093 366 aa5.32□□□□□ -1.56
GEF1YJR040W YBR090CP38253 122 aa5.32□□□□□ -1.56
GEF1YJR040W YFL054CP43549 646 aa5.32□□□□□ -1.56
GEF1YJR040W RAF1Q06891 181 aa5.32□□□□□ -1.56
GEF1YJR040W GEP5Q12393 293 aa5.32□□□□□ -1.56
GEF1YJR040W YER190C-BP0CX94 160 aa5.31□□□□□ -1.56
GEF1YJR040W YEL077W-AP0CX95 160 aa5.31□□□□□ -1.56
GEF1YJR040W YGR296C-BP0CX96 160 aa5.31□□□□□ -1.56
GEF1YJR040W YPL283W-BP0CX97 160 aa5.31□□□□□ -1.56
GEF1YJR040W YPR204C-AP0CX98 160 aa5.31□□□□□ -1.56
GEF1YJR040W NTC20P38302 140 aaPredicted RBP5.31□□□□□ -1.56
GEF1YJR040W DFG10P40526 253 aa5.31□□□□□ -1.56
GEF1YJR040W SEC16P48415 2195 aaKnown RBP5.31□□□□□ -1.56
GEF1YJR040W FOL3Q12676 427 aaPredicted RBP5.31□□□□□ -1.56
GEF1YJR040W MSI1P13712 422 aa5.31□□□□□ -1.56
GEF1YJR040W SAG1P20840 650 aa5.31□□□□□ -1.56
GEF1YJR040W YBL059WP34224 193 aa5.31□□□□□ -1.56
GEF1YJR040W MCH2P36032 473 aa5.31□□□□□ -1.56
GEF1YJR040W TDA4P47153 279 aa5.31□□□□□ -1.56
GEF1YJR040W DYN2Q02647 92 aa5.31□□□□□ -1.56
GEF1YJR040W ATG40Q99325 256 aa5.31□□□□□ -1.56
GEF1YJR040W CDC39P25655 2108 aaKnown RBP5.31□□□□□ -1.56
GEF1YJR040W UGX2P32772 223 aa5.3□□□□□ -1.56
GEF1YJR040W ZRT1P32804 376 aa5.3□□□□□ -1.56
GEF1YJR040W YUH1P35127 236 aa5.3□□□□□ -1.56
GEF1YJR040W YNL200CP40165 246 aaKnown RBP5.3□□□□□ -1.56
GEF1YJR040W YML079WQ03629 201 aa5.3□□□□□ -1.56
GEF1YJR040W MPD1Q12404 318 aaKnown RBP5.3□□□□□ -1.56
GEF1YJR040W HEM4P06174 275 aa5.3□□□□□ -1.56
GEF1YJR040W IMP1P28627 190 aa5.3□□□□□ -1.56
GEF1YJR040W SRP21P32342 167 aa5.3□□□□□ -1.56
GEF1YJR040W YHR130CP38834 111 aa5.3□□□□□ -1.56
GEF1YJR040W CCS1P40202 249 aaKnown RBP5.3□□□□□ -1.56
GEF1YJR040W YFL065CP43539 102 aa5.3□□□□□ -1.56
GEF1YJR040W YGR050CP53231 118 aa5.3□□□□□ -1.56
GEF1YJR040W CPD1P53314 239 aa5.3□□□□□ -1.56
GEF1YJR040W WSC2P53832 503 aa5.3□□□□□ -1.56
GEF1YJR040W SWT21P53873 357 aaPredicted RBP5.3□□□□□ -1.56
GEF1YJR040W YOR292CQ08743 309 aa5.3□□□□□ -1.56
GEF1YJR040W YPR203WQ08994 102 aa5.3□□□□□ -1.56
GEF1YJR040W POC4Q12245 148 aaPredicted RBP5.3□□□□□ -1.56
GEF1YJR040W DER1P38307 211 aa5.29□□□□□ -1.56
GEF1YJR040W YIP5P53108 310 aa5.29□□□□□ -1.56
GEF1YJR040W YNR071CP53757 342 aa5.29□□□□□ -1.56
GEF1YJR040W VPS71Q03433 280 aa5.29□□□□□ -1.56
GEF1YJR040W ECM18Q04623 453 aa5.29□□□□□ -1.56
GEF1YJR040W FIT3Q08907 204 aa5.29□□□□□ -1.56
GEF1YJR040W TOA2P32774 122 aa5.29□□□□□ -1.56
GEF1YJR040W ECM14P38836 430 aa5.29□□□□□ -1.56
GEF1YJR040W COX15P40086 486 aa5.29□□□□□ -1.56
GEF1YJR040W ARP3P47117 449 aaKnown RBP5.29□□□□□ -1.56
GEF1YJR040W MIC27P50945 234 aa5.29□□□□□ -1.56
GEF1YJR040W YGL118CP53132 145 aa5.29□□□□□ -1.56
GEF1YJR040W YMR254CQ04838 102 aa5.29□□□□□ -1.56
GEF1YJR040W YPR098CQ06089 161 aa5.29□□□□□ -1.56
GEF1YJR040W CYB5P40312 120 aa5.28□□□□□ -1.56
GEF1YJR040W SAS2P40963 338 aa5.28□□□□□ -1.56
GEF1YJR040W POP3P53833 195 aaPredicted RBP5.28□□□□□ -1.56
GEF1YJR040W WSC3Q12215 556 aa5.28□□□□□ -1.56
GEF1YJR040W YAR068WP39564 161 aa5.28□□□□□ -1.56
GEF1YJR040W SUT1P53032 299 aaKnown RBP5.28□□□□□ -1.56
GEF1YJR040W DPP1Q05521 289 aa5.28□□□□□ -1.56
GEF1YJR040W POM34Q12445 299 aa5.28□□□□□ -1.56
GEF1YJR040W YOX1P34161 385 aa5.27□□□□□ -1.57
GEF1YJR040W ATX1P38636 73 aa5.27□□□□□ -1.57
GEF1YJR040W MTC6P38849 526 aa5.27□□□□□ -1.57
GEF1YJR040W SEC72P39742 193 aaKnown RBP5.27□□□□□ -1.57
GEF1YJR040W YIL029CP40538 142 aa5.27□□□□□ -1.57
GEF1YJR040W BRP1P53194 125 aa5.27□□□□□ -1.57
GEF1YJR040W YNR064CP53750 290 aa5.27□□□□□ -1.57
GEF1YJR040W BET5Q03630 159 aa5.27□□□□□ -1.57
GEF1YJR040W MRS1P07266 363 aa5.26□□□□□ -1.57
GEF1YJR040W RPL35AP0CX84 120 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W RPL35BP0CX85 120 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W YHL037CP38733 133 aa5.26□□□□□ -1.57
GEF1YJR040W YER084WP40057 128 aa5.26□□□□□ -1.57
GEF1YJR040W DSK2P48510 373 aa5.26□□□□□ -1.57
GEF1YJR040W SIP18P50263 79 aa5.26□□□□□ -1.57
GEF1YJR040W CRZ1P53968 678 aa5.26□□□□□ -1.57
GEF1YJR040W YLR361C-AQ3E795 98 aa5.26□□□□□ -1.57
GEF1YJR040W RPL12AP0CX53 165 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W RPL12BP0CX54 165 aa5.26□□□□□ -1.57
GEF1YJR040W HEM13P11353 328 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W RPS2P25443 254 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W QRI5P32344 111 aa5.26□□□□□ -1.57
GEF1YJR040W MRPS5P33759 307 aa5.26□□□□□ -1.57
GEF1YJR040W YGP1P38616 354 aaKnown RBP5.26□□□□□ -1.57
GEF1YJR040W OST1P41543 476 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms