RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YKL102CP34249 101 aa1.01□□□□□ -2.25
PEP8YJL053W EGD2P38879 174 aaKnown RBP1.01□□□□□ -2.25
PEP8YJL053W NVJ1P38881 321 aa1.01□□□□□ -2.25
PEP8YJL053W POG1P40473 351 aa1.01□□□□□ -2.25
PEP8YJL053W SBH2P52871 88 aa1.01□□□□□ -2.25
PEP8YJL053W VPS28Q02767 242 aa1.01□□□□□ -2.25
PEP8YJL053W ATG38Q05789 226 aaKnown RBP1.01□□□□□ -2.25
PEP8YJL053W ATP20Q12233 115 aa1.01□□□□□ -2.25
PEP8YJL053W RRP5Q05022 1729 aaKnown RBP1.01□□□□□ -2.25
PEP8YJL053W HSP30P25619 332 aa1□□□□□ -2.25
PEP8YJL053W RFC2P40348 353 aa1□□□□□ -2.25
PEP8YJL053W TIM13P53299 105 aa1□□□□□ -2.25
PEP8YJL053W PLP1Q04004 230 aa1□□□□□ -2.25
PEP8YJL053W YBL010CP32788 280 aa0.99□□□□□ -2.25
PEP8YJL053W RRT1P38192 103 aa0.99□□□□□ -2.25
PEP8YJL053W YEL008WP40001 126 aa0.99□□□□□ -2.25
PEP8YJL053W NSE4P43124 402 aa0.99□□□□□ -2.25
PEP8YJL053W XPT1P47165 209 aa0.99□□□□□ -2.25
PEP8YJL053W HHT1P61830 136 aa0.99□□□□□ -2.25
PEP8YJL053W DML1Q03652 475 aa0.99□□□□□ -2.25
PEP8YJL053W YPR127WQ06494 345 aa0.99□□□□□ -2.25
PEP8YJL053W YOR214CQ12282 236 aa0.99□□□□□ -2.25
PEP8YJL053W PEX11Q12462 236 aa0.99□□□□□ -2.25
PEP8YJL053W YMR030W-AQ3E760 96 aa0.99□□□□□ -2.25
PEP8YJL053W COA3Q3E7B2 85 aa0.99□□□□□ -2.25
PEP8YJL053W SEN2P16658 377 aa0.98□□□□□ -2.25
PEP8YJL053W CLG1P35190 452 aa0.98□□□□□ -2.25
PEP8YJL053W YKR041WP36134 250 aa0.98□□□□□ -2.25
PEP8YJL053W MAK5P38112 773 aaPredicted RBP0.98□□□□□ -2.25
PEP8YJL053W YLR460CP54007 376 aa0.98□□□□□ -2.25
PEP8YJL053W YKR005CQ02203 525 aa0.98□□□□□ -2.25
PEP8YJL053W MET31Q03081 177 aa0.98□□□□□ -2.25
PEP8YJL053W GAL83Q04739 417 aa0.98□□□□□ -2.25
PEP8YJL053W UPS1Q05776 175 aa0.98□□□□□ -2.25
PEP8YJL053W APC1P53886 1748 aa0.98□□□□□ -2.25
PEP8YJL053W MAK31P23059 88 aa0.97□□□□□ -2.25
PEP8YJL053W UBC8P28263 218 aa0.97□□□□□ -2.25
PEP8YJL053W NUF2P33895 451 aa0.97□□□□□ -2.25
PEP8YJL053W YRA2P36036 203 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
PEP8YJL053W SRP14P38985 146 aa0.97□□□□□ -2.25
PEP8YJL053W HUA1P40325 198 aa0.97□□□□□ -2.25
PEP8YJL053W GLR1P41921 483 aaKnown RBP0.97□□□□□ -2.25
PEP8YJL053W RPL37AP49166 88 aaKnown RBP0.97□□□□□ -2.25
PEP8YJL053W YGL235WP53071 178 aa0.97□□□□□ -2.25
PEP8YJL053W YHP1Q04116 353 aa0.97□□□□□ -2.25
PEP8YJL053W YDR391CQ04170 232 aa0.97□□□□□ -2.25
PEP8YJL053W FYV12Q08559 129 aa0.97□□□□□ -2.25
PEP8YJL053W ATG41Q12048 136 aa0.97□□□□□ -2.25
PEP8YJL053W RAD6P06104 172 aa0.96□□□□□ -2.26
PEP8YJL053W RAD51P25454 400 aa0.96□□□□□ -2.26
PEP8YJL053W AHT1P29589 182 aa0.96□□□□□ -2.26
PEP8YJL053W MRPL15P36523 253 aa0.96□□□□□ -2.26
PEP8YJL053W MPM1P40364 252 aa0.96□□□□□ -2.26
PEP8YJL053W MOB1P40484 314 aa0.96□□□□□ -2.26
PEP8YJL053W TTI2P47168 421 aa0.96□□□□□ -2.26
PEP8YJL053W TLG1Q03322 224 aa0.96□□□□□ -2.26
PEP8YJL053W HRD1Q08109 551 aa0.96□□□□□ -2.26
PEP8YJL053W YLR050CQ12155 161 aaKnown RBP0.96□□□□□ -2.26
PEP8YJL053W MEC1P38111 2368 aa0.96□□□□□ -2.26
PEP8YJL053W URB1P34241 1764 aaKnown RBP0.96□□□□□ -2.26
PEP8YJL053W RIF1P29539 1916 aa0.95□□□□□ -2.26
PEP8YJL053W CMD1P06787 147 aaKnown RBP0.95□□□□□ -2.26
PEP8YJL053W RME1P32338 300 aaKnown RBP0.95□□□□□ -2.26
PEP8YJL053W VPS51P36116 164 aa0.95□□□□□ -2.26
PEP8YJL053W CCS1P40202 249 aaKnown RBP0.95□□□□□ -2.26
PEP8YJL053W PST2Q12335 198 aaKnown RBP0.95□□□□□ -2.26
PEP8YJL053W YOR381W-AQ3E804 55 aa0.95□□□□□ -2.26
PEP8YJL053W FIG2P25653 1609 aa0.94□□□□□ -2.26
PEP8YJL053W RPL35AP0CX84 120 aaKnown RBP0.94□□□□□ -2.26
PEP8YJL053W RPL35BP0CX85 120 aaKnown RBP0.94□□□□□ -2.26
PEP8YJL053W ETR1P38071 380 aa0.94□□□□□ -2.26
PEP8YJL053W YBR242WP38331 238 aa0.94□□□□□ -2.26
PEP8YJL053W FYV4P38783 130 aaPredicted RBP0.94□□□□□ -2.26
PEP8YJL053W NQM1P53228 333 aaPredicted RBP0.94□□□□□ -2.26
PEP8YJL053W YIP3P53633 176 aa0.94□□□□□ -2.26
PEP8YJL053W TMA20P89886 181 aaPredicted RBP0.94□□□□□ -2.26
PEP8YJL053W YML079WQ03629 201 aa0.94□□□□□ -2.26
PEP8YJL053W RIM9Q04734 239 aa0.94□□□□□ -2.26
PEP8YJL053W SMD2Q06217 110 aaKnown RBP0.94□□□□□ -2.26
PEP8YJL053W TAR1Q8TGM6 124 aa0.94□□□□□ -2.26
PEP8YJL053W RAD50P12753 1312 aa0.93□□□□□ -2.26
PEP8YJL053W YNL200CP40165 246 aaKnown RBP0.93□□□□□ -2.26
PEP8YJL053W SOL1P50278 321 aa0.93□□□□□ -2.26
PEP8YJL053W FIT1Q04433 528 aa0.93□□□□□ -2.26
PEP8YJL053W ELP6Q04868 273 aa0.93□□□□□ -2.26
PEP8YJL053W FLO1P32768 1537 aa0.93□□□□□ -2.26
PEP8YJL053W UBR1P19812 1950 aa0.92□□□□□ -2.26
PEP8YJL053W TY4B-HP0C2J7 1802 aa0.92□□□□□ -2.26
PEP8YJL053W TY4B-JP47024 1803 aa0.92□□□□□ -2.26
PEP8YJL053W UBC6P33296 250 aaPredicted RBP0.92□□□□□ -2.26
PEP8YJL053W YEL073CP39974 107 aa0.92□□□□□ -2.26
PEP8YJL053W PAC10P48363 199 aa0.92□□□□□ -2.26
PEP8YJL053W YNL140CP53910 189 aa0.92□□□□□ -2.26
PEP8YJL053W SYM1Q06563 197 aa0.92□□□□□ -2.26
PEP8YJL053W YPR203WQ08994 102 aa0.92□□□□□ -2.26
PEP8YJL053W YDL157CQ12082 118 aa0.92□□□□□ -2.26
PEP8YJL053W YDR524C-BQ3E6R4 66 aa0.92□□□□□ -2.26
PEP8YJL053W FKS3Q04952 1785 aa0.91□□□□□ -2.26
PEP8YJL053W GSC2P40989 1895 aa0.91□□□□□ -2.26
PEP8YJL053W PRE1P22141 198 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms