RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C YPR145C-AQ2V2P0 78 aa7.55□□□□□ -1.2
MET28YIR017C MRPL20P22354 195 aaPredicted RBP7.54□□□□□ -1.2
MET28YIR017C MBB1P39534 108 aa7.54□□□□□ -1.2
MET28YIR017C AIM24P47127 394 aa7.54□□□□□ -1.2
MET28YIR017C SNO1Q03144 224 aa7.54□□□□□ -1.2
MET28YIR017C RPB3P16370 318 aaKnown RBP7.53□□□□□ -1.2
MET28YIR017C LAC1P28496 418 aa7.53□□□□□ -1.2
MET28YIR017C ECM33P38248 429 aaKnown RBP7.53□□□□□ -1.2
MET28YIR017C MPC2P38857 129 aa7.53□□□□□ -1.2
MET28YIR017C TDA4P47153 279 aa7.53□□□□□ -1.2
MET28YIR017C FYV6P53913 173 aa7.53□□□□□ -1.2
MET28YIR017C DAD3P69850 94 aa7.53□□□□□ -1.2
MET28YIR017C COQ3P27680 312 aa7.52□□□□□ -1.21
MET28YIR017C MRPL4P36517 319 aa7.52□□□□□ -1.21
MET28YIR017C YIL163CP40448 117 aa7.52□□□□□ -1.21
MET28YIR017C TOM7P53507 60 aa7.52□□□□□ -1.21
MET28YIR017C TRI1Q05024 226 aa7.52□□□□□ -1.21
MET28YIR017C YOL160WQ08321 113 aa7.52□□□□□ -1.21
MET28YIR017C GEP3Q08622 556 aa7.52□□□□□ -1.21
MET28YIR017C YPL162CQ12042 273 aa7.52□□□□□ -1.21
MET28YIR017C ISU2Q12056 156 aa7.52□□□□□ -1.21
MET28YIR017C YOR011W-AQ3E807 68 aa7.52□□□□□ -1.21
MET28YIR017C CNB1P25296 175 aa7.51□□□□□ -1.21
MET28YIR017C LCB3P47013 409 aa7.51□□□□□ -1.21
MET28YIR017C ALG13P53178 202 aa7.51□□□□□ -1.21
MET28YIR017C TIM21P53220 239 aa7.51□□□□□ -1.21
MET28YIR017C YIP3P53633 176 aa7.51□□□□□ -1.21
MET28YIR017C RAV2Q03956 351 aa7.51□□□□□ -1.21
MET28YIR017C YLR302CO13544 120 aa7.5□□□□□ -1.21
MET28YIR017C HTB2P02294 131 aa7.5□□□□□ -1.21
MET28YIR017C ADH3P07246 375 aaKnown RBP7.5□□□□□ -1.21
MET28YIR017C MRPS9P38120 278 aa7.5□□□□□ -1.21
MET28YIR017C SIM1P40472 476 aa7.5□□□□□ -1.21
MET28YIR017C BNS1P50084 137 aa7.5□□□□□ -1.21
MET28YIR017C RPL31BP0C2H9 113 aaKnown RBP7.49□□□□□ -1.21
MET28YIR017C HUA1P40325 198 aa7.49□□□□□ -1.21
MET28YIR017C HIT1P46973 164 aa7.49□□□□□ -1.21
MET28YIR017C NAT3Q06504 195 aa7.49□□□□□ -1.21
MET28YIR017C TAR1Q8TGM6 124 aa7.49□□□□□ -1.21
MET28YIR017C FMP49A0A023PZB3 126 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-DR4O74302 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-AP0CX57 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-PR1P0CX58 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-ORP0CX59 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-PR2P0CX60 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-DR5P0CX65 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-ER2P0CX66 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-GR3P0CX67 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-LR1P0CX68 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-MR2P0CX69 440 aa7.48□□□□□ -1.21
MET28YIR017C YPT10P38146 199 aa7.48□□□□□ -1.21
MET28YIR017C HSP10P38910 106 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-JR2P47099 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-DR1Q03856 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-ML1Q04706 440 aaKnown RBP7.48□□□□□ -1.21
MET28YIR017C SMT3Q12306 101 aaKnown RBP7.48□□□□□ -1.21
MET28YIR017C DCN1Q12395 269 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-NL2Q12470 440 aa7.48□□□□□ -1.21
MET28YIR017C TY1A-GR2Q12485 440 aa7.48□□□□□ -1.21
MET28YIR017C YNL146C-AQ3E7Z1 64 aa7.48□□□□□ -1.21
MET28YIR017C NTF2P33331 125 aaKnown RBP7.47□□□□□ -1.21
MET28YIR017C AME1P38313 324 aa7.47□□□□□ -1.21
MET28YIR017C PGD1P40356 397 aa7.47□□□□□ -1.21
MET28YIR017C HAM1P47119 197 aaKnown RBP7.47□□□□□ -1.21
MET28YIR017C COX18P53239 316 aa7.47□□□□□ -1.21
MET28YIR017C DAD4P69851 72 aa7.47□□□□□ -1.21
MET28YIR017C ATP19P81451 68 aa7.47□□□□□ -1.21
MET28YIR017C GRH1Q04410 372 aaKnown RBP7.47□□□□□ -1.21
MET28YIR017C STP4Q07351 490 aa7.47□□□□□ -1.21
MET28YIR017C YOR105WQ08504 108 aa7.47□□□□□ -1.21
MET28YIR017C DAD1Q12248 94 aa7.47□□□□□ -1.21
MET28YIR017C PRM7Q12459 698 aa7.47□□□□□ -1.21
MET28YIR017C SDH4P37298 181 aa7.46□□□□□ -1.22
MET28YIR017C PRE5P40302 234 aaKnown RBP7.46□□□□□ -1.22
MET28YIR017C YGL185CP53100 379 aa7.46□□□□□ -1.22
MET28YIR017C YGR025WP53216 100 aa7.46□□□□□ -1.22
MET28YIR017C YDR274CP87283 123 aa7.46□□□□□ -1.22
MET28YIR017C POF1P25576 258 aa7.45□□□□□ -1.22
MET28YIR017C SRP21P32342 167 aa7.45□□□□□ -1.22
MET28YIR017C ATG8P38182 117 aaRIP-Chip data7.45□□□□□ -1.22not detected
MET28YIR017C VMA21P41806 77 aa7.45□□□□□ -1.22
MET28YIR017C VPS71Q03433 280 aa7.45□□□□□ -1.22
MET28YIR017C ZEO1Q08245 113 aa7.45□□□□□ -1.22
MET28YIR017C YPR063CQ12160 140 aa7.45□□□□□ -1.22
MET28YIR017C MDM10P18409 493 aa7.44□□□□□ -1.22
MET28YIR017C PRE9P23638 258 aaKnown RBP7.44□□□□□ -1.22
MET28YIR017C MIC26P50087 233 aa7.44□□□□□ -1.22
MET28YIR017C MGA1P53050 456 aa7.44□□□□□ -1.22
MET28YIR017C APS2Q00381 147 aa7.44□□□□□ -1.22
MET28YIR017C YLR122CQ12312 125 aa7.44□□□□□ -1.22
MET28YIR017C NHP6AP11632 93 aaKnown RBP7.43□□□□□ -1.22
MET28YIR017C CPT1P17898 393 aa7.43□□□□□ -1.22
MET28YIR017C GET2P40056 285 aa7.43□□□□□ -1.22
MET28YIR017C YER135CP40082 130 aa7.43□□□□□ -1.22
MET28YIR017C YMR141CP40211 102 aa7.43□□□□□ -1.22
MET28YIR017C YDL183CP48569 320 aa7.43□□□□□ -1.22
MET28YIR017C YLR118CQ12354 227 aa7.43□□□□□ -1.22
MET28YIR017C TY1A-LR4P0C2I8 440 aaKnown RBP7.42□□□□□ -1.22
MET28YIR017C TY1A-DR6P0CX70 440 aa7.42□□□□□ -1.22
MET28YIR017C TY1A-ER1P0CX71 440 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms