RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	IRC19	Q07843	230 aa		0.89	□□□□□ -2.27
IST3	YIR005W	FCY1	Q12178	158 aa		0.89	□□□□□ -2.27
IST3	YIR005W	UBR1	P19812	1950 aa		0.88	□□□□□ -2.27
IST3	YIR005W	PET54	P10834	293 aa		0.88	□□□□□ -2.27
IST3	YIR005W	DDR48	P18899	430 aa	Known RBP	0.88	□□□□□ -2.27
IST3	YIR005W	PRE1	P22141	198 aa	Known RBP	0.88	□□□□□ -2.27
IST3	YIR005W	DCV1	P43595	202 aa		0.88	□□□□□ -2.27
IST3	YIR005W	EFM5	P53200	248 aa	Known RBP	0.88	□□□□□ -2.27
IST3	YIR005W	RCF2	P53721	224 aa		0.88	□□□□□ -2.27
IST3	YIR005W	NMA1	Q06178	401 aa	Known RBP	0.88	□□□□□ -2.27
IST3	YIR005W	CCW12	Q12127	133 aa		0.88	□□□□□ -2.27
IST3	YIR005W	IPT1	P38954	527 aa		0.87	□□□□□ -2.27
IST3	YIR005W	YJR015W	P47090	510 aa		0.87	□□□□□ -2.27
IST3	YIR005W	YPD1	Q07688	167 aa		0.87	□□□□□ -2.27
IST3	YIR005W	YBR027C	P38220	110 aa		0.86	□□□□□ -2.27
IST3	YIR005W	IPI1	P38803	334 aa	Predicted RBP	0.86	□□□□□ -2.27
IST3	YIR005W	YAR064W	P39563	99 aa		0.86	□□□□□ -2.27
IST3	YIR005W	RPL37B	P51402	88 aa	Known RBP	0.86	□□□□□ -2.27
IST3	YIR005W	YDC1	Q02896	317 aa		0.86	□□□□□ -2.27
IST3	YIR005W	EST3	Q03096	181 aa		0.86	□□□□□ -2.27
IST3	YIR005W	YMR320W	Q04897	101 aa		0.86	□□□□□ -2.27
IST3	YIR005W	KEI1	Q06346	221 aa		0.86	□□□□□ -2.27
IST3	YIR005W	YGL041W-A	P0C5N3	154 aa		0.85	□□□□□ -2.27
IST3	YIR005W	APS3	P47064	194 aa		0.85	□□□□□ -2.27
IST3	YIR005W	MOG1	P47123	218 aa		0.85	□□□□□ -2.27
IST3	YIR005W	RRT7	Q07829	113 aa		0.85	□□□□□ -2.27
IST3	YIR005W	SCS22	Q6Q595	175 aa		0.85	□□□□□ -2.27
IST3	YIR005W	CDC39	P25655	2108 aa	Known RBP	0.85	□□□□□ -2.27
IST3	YIR005W	HFA1	P32874	2273 aa		0.84	□□□□□ -2.27
IST3	YIR005W	UGX2	P32772	223 aa		0.84	□□□□□ -2.27
IST3	YIR005W	PKR1	Q03880	122 aa	Known RBP	0.84	□□□□□ -2.27
IST3	YIR005W	RAV2	Q03956	351 aa		0.84	□□□□□ -2.27
IST3	YIR005W	YPR153W	Q06537	140 aa		0.84	□□□□□ -2.27
IST3	YIR005W	VAM10	Q08474	114 aa		0.84	□□□□□ -2.27
IST3	YIR005W	YOR1	P53049	1477 aa		0.84	□□□□□ -2.28
IST3	YIR005W	COX5B	P00425	151 aa		0.83	□□□□□ -2.28
IST3	YIR005W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.83	□□□□□ -2.28
IST3	YIR005W	HSP12	P22943	109 aa	Known RBP	0.83	□□□□□ -2.28
IST3	YIR005W	ECM31	P38122	312 aa		0.83	□□□□□ -2.28
IST3	YIR005W	ATG8	P38182	117 aa	RIP-Chip data	0.83	□□□□□ -2.28	not detected
IST3	YIR005W	YGR201C	P42936	225 aa		0.83	□□□□□ -2.28
IST3	YIR005W	YER188C-A	P0C0V2	99 aa		0.82	□□□□□ -2.28
IST3	YIR005W	YCR001W	P25347	104 aa		0.82	□□□□□ -2.28
IST3	YIR005W	YIL102C	P40488	101 aa		0.82	□□□□□ -2.28
IST3	YIR005W	GPI11	Q06636	219 aa		0.82	□□□□□ -2.28
IST3	YIR005W	GPI2	P46961	280 aa		0.81	□□□□□ -2.28
IST3	YIR005W	ATP19	P81451	68 aa		0.81	□□□□□ -2.28
IST3	YIR005W	TMA23	Q03525	211 aa		0.81	□□□□□ -2.28
IST3	YIR005W	AIM36	Q03798	255 aa		0.81	□□□□□ -2.28
IST3	YIR005W	NHP6A	P11632	93 aa	Known RBP	0.8	□□□□□ -2.28
IST3	YIR005W	HYP2	P23301	157 aa	Known RBP	0.8	□□□□□ -2.28
IST3	YIR005W	FYV5	P25585	152 aa		0.8	□□□□□ -2.28
IST3	YIR005W	DIE2	P50076	525 aa		0.8	□□□□□ -2.28
IST3	YIR005W	YCL001W-A	P87012	153 aa		0.8	□□□□□ -2.28
IST3	YIR005W	SED1	Q01589	338 aa		0.8	□□□□□ -2.28
IST3	YIR005W	SEN15	Q04675	128 aa		0.8	□□□□□ -2.28
IST3	YIR005W	RIB3	Q99258	208 aa		0.8	□□□□□ -2.28
IST3	YIR005W	HSL1	P34244	1518 aa		0.79	□□□□□ -2.28
IST3	YIR005W	RPS1B	P23248	255 aa	Known RBP	0.79	□□□□□ -2.28
IST3	YIR005W	SUI1	P32911	108 aa	Known RBP	0.79	□□□□□ -2.28
IST3	YIR005W	LSM1	P47017	172 aa	Known RBP	0.79	□□□□□ -2.28
IST3	YIR005W	YNL122C	P53921	115 aa	Predicted RBP	0.79	□□□□□ -2.28
IST3	YIR005W	SOM1	Q05676	74 aa		0.79	□□□□□ -2.28
IST3	YIR005W	RPL33A	P05744	107 aa	Known RBP	0.78	□□□□□ -2.28
IST3	YIR005W	YDR366C	P87287	132 aa		0.78	□□□□□ -2.28
IST3	YIR005W	YOR385W	Q08909	290 aa		0.78	□□□□□ -2.28
IST3	YIR005W	YGL014C-A	P0C5N1	53 aa		0.77	□□□□□ -2.29
IST3	YIR005W	TRS20	P38334	175 aa		0.77	□□□□□ -2.29
IST3	YIR005W	YAP3	P38749	330 aa		0.77	□□□□□ -2.29
IST3	YIR005W	YHR140W	P38842	239 aa		0.77	□□□□□ -2.29
IST3	YIR005W	PHB1	P40961	287 aa		0.77	□□□□□ -2.29
IST3	YIR005W	RBL2	P48606	106 aa	Known RBP	0.77	□□□□□ -2.29
IST3	YIR005W	COF1	Q03048	143 aa	Known RBP	0.77	□□□□□ -2.29
IST3	YIR005W	HUT1	Q12520	339 aa		0.77	□□□□□ -2.29
IST3	YIR005W	DDP1	Q99321	188 aa	Known RBP	0.77	□□□□□ -2.29
IST3	YIR005W	ROM2	P51862	1356 aa	Known RBP	0.77	□□□□□ -2.29
IST3	YIR005W	FMP49	A0A023PZB3	126 aa		0.76	□□□□□ -2.29
IST3	YIR005W	HHY1	P39982	102 aa		0.76	□□□□□ -2.29
IST3	YIR005W	VMA10	P48836	114 aa	Known RBP	0.76	□□□□□ -2.29
IST3	YIR005W	SPC3	Q12133	184 aa		0.76	□□□□□ -2.29
IST3	YIR005W	MHF1	Q3E835	90 aa		0.76	□□□□□ -2.29
IST3	YIR005W	HHO1	P53551	258 aa		0.75	□□□□□ -2.29
IST3	YIR005W	HAP2	P06774	265 aa		0.74	□□□□□ -2.29
IST3	YIR005W	LST8	P41318	303 aa		0.74	□□□□□ -2.29
IST3	YIR005W	YGR039W	P53225	103 aa		0.74	□□□□□ -2.29
IST3	YIR005W	MGR2	Q02889	113 aa		0.74	□□□□□ -2.29
IST3	YIR005W	YMR122C	Q03879	124 aa		0.74	□□□□□ -2.29
IST3	YIR005W	PRM3	Q08931	133 aa		0.74	□□□□□ -2.29
IST3	YIR005W	RPL40A	P0CH08	128 aa	Known RBP	0.73	□□□□□ -2.29
IST3	YIR005W	RPL40B	P0CH09	128 aa	Known RBP	0.73	□□□□□ -2.29
IST3	YIR005W	FUN14	P18411	198 aa		0.73	□□□□□ -2.29
IST3	YIR005W	RPS1A	P33442	255 aa	Known RBP	0.73	□□□□□ -2.29
IST3	YIR005W	HPM1	P40481	377 aa		0.73	□□□□□ -2.29
IST3	YIR005W	LSM8	P47093	109 aa	Known RBP	0.73	□□□□□ -2.29
IST3	YIR005W	YNL019C	P53975	284 aa		0.73	□□□□□ -2.29
IST3	YIR005W	RAF1	Q06891	181 aa		0.73	□□□□□ -2.29
IST3	YIR005W	GSC2	P40989	1895 aa		0.72	□□□□□ -2.29
IST3	YIR005W	RPS22A	P0C0W1	130 aa	Known RBP	0.72	□□□□□ -2.29
IST3	YIR005W	NMT1	P14743	455 aa		0.72	□□□□□ -2.29
IST3	YIR005W	RPL14A	P36105	138 aa	Known RBP	0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms