RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	TY4B-J	P47024	1803 aa		0.22	□□□□□ -2.37
SPO11	YHL022C	ROM2	P51862	1356 aa	Known RBP	0.22	□□□□□ -2.37
SPO11	YHL022C	HSP150	P32478	413 aa		0.22	□□□□□ -2.37
SPO11	YHL022C	HTD2	P38790	280 aa	Known RBP	0.22	□□□□□ -2.37
SPO11	YHL022C	CCC1	P47818	322 aa		0.22	□□□□□ -2.37
SPO11	YHL022C	RPL33A	P05744	107 aa	Known RBP	0.21	□□□□□ -2.38
SPO11	YHL022C	RPL43A	P0CX25	92 aa	Known RBP	0.21	□□□□□ -2.38
SPO11	YHL022C	RPL43B	P0CX26	92 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	RPL30	P14120	105 aa	Known RBP	0.21	□□□□□ -2.38
SPO11	YHL022C	FES1	P38260	290 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	IPT1	P38954	527 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	YMR141C	P40211	102 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	DLS1	P40366	167 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	YJL009W	P47078	108 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	YGL193C	P53097	103 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	RCF2	P53721	224 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	YDR102C	Q03864	110 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	GIM5	Q04493	163 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	YPD1	Q07688	167 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	CMC2	Q3E7A4	109 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	TY1B-H	O13535	1793 aa		0.21	□□□□□ -2.38
SPO11	YHL022C	URA2	P07259	2214 aa	Known RBP	0.2	□□□□□ -2.38
SPO11	YHL022C	UBI4	P0CG63	381 aa	Known RBP	0.2	□□□□□ -2.38
SPO11	YHL022C	ATG8	P38182	117 aa	RIP-Chip data	0.2	□□□□□ -2.38	not detected
SPO11	YHL022C	SLM6	P38343	150 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	YGL101W	P53144	215 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	ORM1	P53224	222 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	ATP19	P81451	68 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	YPR153W	Q06537	140 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	RRT7	Q07829	113 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	YLR053C	Q12026	108 aa		0.2	□□□□□ -2.38
SPO11	YHL022C	MYO1	P08964	1928 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	QCR2	P07257	368 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	NHP6A	P11632	93 aa	Known RBP	0.19	□□□□□ -2.38
SPO11	YHL022C	MRS4	P23500	304 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	PEX34	P25584	144 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	SRL3	P36167	246 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	YER121W	P40076	114 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	APQ12	P40532	138 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	FIP1	P45976	327 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	SEN15	Q04675	128 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	IRC21	Q04772	201 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	IRC19	Q07843	230 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	RFU1	Q08003	200 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	RDI1	Q12434	202 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	HUT1	Q12520	339 aa		0.19	□□□□□ -2.38
SPO11	YHL022C	PHO13	P19881	312 aa		0.18	□□□□□ -2.38
SPO11	YHL022C	BUB2	P26448	306 aa	Predicted RBP	0.18	□□□□□ -2.38
SPO11	YHL022C	GPI2	P46961	280 aa		0.18	□□□□□ -2.38
SPO11	YHL022C	GPI11	Q06636	219 aa		0.18	□□□□□ -2.38
SPO11	YHL022C	YPR202W	Q08993	238 aa		0.18	□□□□□ -2.38
SPO11	YHL022C	BNI1	P41832	1953 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	PBI2	P0CT04	75 aa	Known RBP	0.17	□□□□□ -2.38
SPO11	YHL022C	FAS2	P19097	1887 aa	Known RBP	0.17	□□□□□ -2.38
SPO11	YHL022C	SRP21	P32342	167 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	YER181C	P40097	107 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	EST3	Q03096	181 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	COA6	Q3E846	104 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	SCS22	Q6Q595	175 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	RIB3	Q99258	208 aa		0.17	□□□□□ -2.38
SPO11	YHL022C	RPS28B	P0C0X0	67 aa	Known RBP	0.16	□□□□□ -2.38
SPO11	YHL022C	YGL014C-A	P0C5N1	53 aa		0.16	□□□□□ -2.38
SPO11	YHL022C	MRPL24	P36525	258 aa	Predicted RBP	0.16	□□□□□ -2.38
SPO11	YHL022C	AME1	P38313	324 aa		0.16	□□□□□ -2.38
SPO11	YHL022C	YHR140W	P38842	239 aa		0.16	□□□□□ -2.38
SPO11	YHL022C	YJL218W	P40892	196 aa	Known RBP	0.16	□□□□□ -2.38
SPO11	YHL022C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.16	□□□□□ -2.38
SPO11	YHL022C	YLR307C-A	Q3E825	87 aa		0.16	□□□□□ -2.38
SPO11	YHL022C	KTI11	Q3E840	82 aa		0.16	□□□□□ -2.38
SPO11	YHL022C	COX5B	P00425	151 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	YLR157W-E	P0CF00	54 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	DDR48	P18899	430 aa	Known RBP	0.15	□□□□□ -2.39
SPO11	YHL022C	ANB1	P19211	157 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	VMA10	P48836	114 aa	Known RBP	0.15	□□□□□ -2.39
SPO11	YHL022C	DIE2	P50076	525 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	FIT3	Q08907	204 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	EFG1	Q3E705	233 aa	Known RBP	0.15	□□□□□ -2.39
SPO11	YHL022C	YOR034C-A	Q3E735	80 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	MHF1	Q3E835	90 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	YOR1	P53049	1477 aa		0.15	□□□□□ -2.39
SPO11	YHL022C	FYV5	P25585	152 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	IPI1	P38803	334 aa	Predicted RBP	0.14	□□□□□ -2.39
SPO11	YHL022C	MVB12	P42939	101 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	YNL019C	P53975	284 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	YMR122C	Q03879	124 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	YMR321C	Q04898	105 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	NSL1	Q12143	216 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	HUG1	Q6Q5K6	68 aa		0.14	□□□□□ -2.39
SPO11	YHL022C	URB1	P34241	1764 aa	Known RBP	0.14	□□□□□ -2.39
SPO11	YHL022C	YHR213W	P0CI67	198 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	RPS1B	P23248	255 aa	Known RBP	0.13	□□□□□ -2.39
SPO11	YHL022C	SUI1	P32911	108 aa	Known RBP	0.13	□□□□□ -2.39
SPO11	YHL022C	DER1	P38307	211 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	LST8	P41318	303 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	RAV2	Q03956	351 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	SOM1	Q05676	74 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	RAF1	Q06891	181 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	YRF1-6	P53819	1859 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	SNF2	P22082	1703 aa		0.13	□□□□□ -2.39
SPO11	YHL022C	BRR2	P32639	2163 aa	Known RBP	0.12	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms