RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W YGR269WP40326 108 aa2.32□□□□□ -2.04
PEF1YGR058W YIR020CP40575 100 aa2.32□□□□□ -2.04
PEF1YGR058W YJR056CP47115 236 aa2.32□□□□□ -2.04
PEF1YGR058W MCM22P47167 239 aa2.32□□□□□ -2.04
PEF1YGR058W RPL9BP51401 191 aaKnown RBP2.32□□□□□ -2.04
PEF1YGR058W YGL114WP53134 725 aa2.32□□□□□ -2.04
PEF1YGR058W YNR064CP53750 290 aa2.32□□□□□ -2.04
PEF1YGR058W ERV25P54837 211 aaKnown RBP2.32□□□□□ -2.04
PEF1YGR058W TMA23Q03525 211 aa2.32□□□□□ -2.04
PEF1YGR058W YML108WQ03759 105 aa2.32□□□□□ -2.04
PEF1YGR058W YLR179CQ06252 201 aaKnown RBP2.32□□□□□ -2.04
PEF1YGR058W ARR2Q06597 130 aa2.32□□□□□ -2.04
PEF1YGR058W URA5P13298 226 aaKnown RBP2.31□□□□□ -2.04
PEF1YGR058W FCY2P17064 533 aa2.31□□□□□ -2.04
PEF1YGR058W FPR2P32472 135 aa2.31□□□□□ -2.04
PEF1YGR058W RTC3P38804 111 aaPredicted RBP2.31□□□□□ -2.04
PEF1YGR058W YIL012WP40551 113 aa2.31□□□□□ -2.04
PEF1YGR058W SMD3P43321 101 aaKnown RBP2.31□□□□□ -2.04
PEF1YGR058W TIM11P81449 96 aaPredicted RBP2.31□□□□□ -2.04
PEF1YGR058W DYN2Q02647 92 aa2.31□□□□□ -2.04
PEF1YGR058W MIX17Q03667 156 aa2.31□□□□□ -2.04
PEF1YGR058W YMR253CQ04835 414 aa2.31□□□□□ -2.04
PEF1YGR058W ADH6Q04894 360 aaKnown RBP2.31□□□□□ -2.04
PEF1YGR058W FRQ1Q06389 190 aa2.31□□□□□ -2.04
PEF1YGR058W YOR015WQ12169 119 aa2.31□□□□□ -2.04
PEF1YGR058W POC4Q12245 148 aaPredicted RBP2.31□□□□□ -2.04
PEF1YGR058W PCC1Q3E833 88 aa2.31□□□□□ -2.04
PEF1YGR058W UTP20P35194 2493 aaKnown RBP2.31□□□□□ -2.04
PEF1YGR058W SAL1D6W196 494 aa2.3□□□□□ -2.04
PEF1YGR058W RPS25BP0C0T4 108 aaKnown RBP2.3□□□□□ -2.04
PEF1YGR058W QCR9P22289 66 aa2.3□□□□□ -2.04
PEF1YGR058W SPO13P23624 291 aa2.3□□□□□ -2.04
PEF1YGR058W TOM40P23644 387 aaKnown RBP2.3□□□□□ -2.04
PEF1YGR058W TCA17P32613 152 aa2.3□□□□□ -2.04
PEF1YGR058W SHB17P36136 271 aaKnown RBP2.3□□□□□ -2.04
PEF1YGR058W YKR045CP36138 183 aa2.3□□□□□ -2.04
PEF1YGR058W YHL044WP38727 235 aa2.3□□□□□ -2.04
PEF1YGR058W NSA2P40078 261 aaKnown RBP2.3□□□□□ -2.04
PEF1YGR058W POG1P40473 351 aa2.3□□□□□ -2.04
PEF1YGR058W RIB4P50861 169 aaPredicted RBP2.3□□□□□ -2.04
PEF1YGR058W SSU72P53538 206 aaPredicted RBP2.3□□□□□ -2.04
PEF1YGR058W HHO1P53551 258 aa2.3□□□□□ -2.04
PEF1YGR058W SNO1Q03144 224 aa2.3□□□□□ -2.04
PEF1YGR058W AVO2Q04749 426 aa2.3□□□□□ -2.04
PEF1YGR058W ATO3Q12359 275 aa2.3□□□□□ -2.04
PEF1YGR058W SPO24Q3E752 67 aa2.3□□□□□ -2.04
PEF1YGR058W RPS25AQ3E792 108 aaPredicted RBP2.3□□□□□ -2.04
PEF1YGR058W Q0297Q9ZZV8 51 aa2.3□□□□□ -2.04
PEF1YGR058W HTB1P02293 131 aaKnown RBP2.29□□□□□ -2.04
PEF1YGR058W PAU1P0CE88 120 aa2.29□□□□□ -2.04
PEF1YGR058W PAU14P0CE89 120 aa2.29□□□□□ -2.04
PEF1YGR058W PAU6P0CE90 120 aa2.29□□□□□ -2.04
PEF1YGR058W PAU18P0CE91 120 aa2.29□□□□□ -2.04
PEF1YGR058W PAU8P0CE92 120 aa2.29□□□□□ -2.04
PEF1YGR058W PAU11P0CE93 120 aa2.29□□□□□ -2.04
PEF1YGR058W ACP1P32463 125 aa2.29□□□□□ -2.04
PEF1YGR058W ALK2P32789 676 aaPredicted RBP2.29□□□□□ -2.04
PEF1YGR058W VMA11P32842 164 aa2.29□□□□□ -2.04
PEF1YGR058W RPL14AP36105 138 aaKnown RBP2.29□□□□□ -2.04
PEF1YGR058W CSH1P38287 376 aa2.29□□□□□ -2.04
PEF1YGR058W PAU13P38725 120 aa2.29□□□□□ -2.04
PEF1YGR058W RPL14BP38754 138 aaKnown RBP2.29□□□□□ -2.04
PEF1YGR058W YAR068WP39564 161 aa2.29□□□□□ -2.04
PEF1YGR058W PHS1P40857 217 aa2.29□□□□□ -2.04
PEF1YGR058W YJR015WP47090 510 aa2.29□□□□□ -2.04
PEF1YGR058W MIC27P50945 234 aa2.29□□□□□ -2.04
PEF1YGR058W PAU4P53427 120 aa2.29□□□□□ -2.04
PEF1YGR058W SMD1Q02260 146 aaPredicted RBP2.29□□□□□ -2.04
PEF1YGR058W PAU10Q03050 120 aa2.29□□□□□ -2.04
PEF1YGR058W CSI2Q08054 341 aa2.29□□□□□ -2.04
PEF1YGR058W PAU20Q08322 120 aa2.29□□□□□ -2.04
PEF1YGR058W RAD28Q12021 506 aa2.29□□□□□ -2.04
PEF1YGR058W YPR145C-AQ2V2P0 78 aa2.29□□□□□ -2.04
PEF1YGR058W PAU9Q3E770 120 aa2.29□□□□□ -2.04
PEF1YGR058W DYN1P36022 4092 aa2.28□□□□□ -2.04
PEF1YGR058W URA2P07259 2214 aaKnown RBP2.28□□□□□ -2.04
PEF1YGR058W ADH3P07246 375 aaKnown RBP2.28□□□□□ -2.04
PEF1YGR058W SEC59P20048 519 aa2.28□□□□□ -2.04
PEF1YGR058W NTF2P33331 125 aaKnown RBP2.28□□□□□ -2.04
PEF1YGR058W ATG8P38182 117 aaRIP-Chip data2.28□□□□□ -2.04not detected
PEF1YGR058W DER1P38307 211 aa2.28□□□□□ -2.04
PEF1YGR058W LSM4P40070 187 aaKnown RBP2.28□□□□□ -2.04
PEF1YGR058W PGD1P40356 397 aa2.28□□□□□ -2.04
PEF1YGR058W LST8P41318 303 aa2.28□□□□□ -2.04
PEF1YGR058W TIM21P53220 239 aa2.28□□□□□ -2.04
PEF1YGR058W YMR007WQ03675 126 aa2.28□□□□□ -2.04
PEF1YGR058W YHP1Q04116 353 aa2.28□□□□□ -2.04
PEF1YGR058W SHH3Q04487 196 aa2.28□□□□□ -2.04
PEF1YGR058W CTR3Q06686 241 aa2.28□□□□□ -2.04
PEF1YGR058W FCY1Q12178 158 aa2.28□□□□□ -2.04
PEF1YGR058W SME1Q12330 94 aaPredicted RBP2.28□□□□□ -2.04
PEF1YGR058W YLR118CQ12354 227 aa2.28□□□□□ -2.04
PEF1YGR058W YMR316C-AI2HB70 103 aa2.27□□□□□ -2.05
PEF1YGR058W CUP2P15315 225 aa2.27□□□□□ -2.05
PEF1YGR058W PHO85P17157 305 aa2.27□□□□□ -2.05
PEF1YGR058W YBL071CP38185 102 aa2.27□□□□□ -2.05
PEF1YGR058W YPT31P38555 223 aaKnown RBP2.27□□□□□ -2.05
PEF1YGR058W LOC1P43586 204 aaPredicted RBP2.27□□□□□ -2.05
PEF1YGR058W DAN1P47178 298 aa2.27□□□□□ -2.05
PEF1YGR058W LST7P53237 242 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms