RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W CGI121Q03705 181 aaKnown RBP4.91□□□□□ -1.62
SNU71YGR013W FMN1Q03778 218 aa4.91□□□□□ -1.62
SNU71YGR013W ATP5P09457 212 aa4.9□□□□□ -1.62
SNU71YGR013W SPO13P23624 291 aa4.9□□□□□ -1.62
SNU71YGR013W OCH1P31755 480 aa4.9□□□□□ -1.62
SNU71YGR013W SKI6P46948 246 aaPredicted RBP4.9□□□□□ -1.62
SNU71YGR013W SPG3Q04398 127 aaPredicted RBP4.9□□□□□ -1.62
SNU71YGR013W SEN15Q04675 128 aa4.9□□□□□ -1.62
SNU71YGR013W PCC1Q3E833 88 aa4.9□□□□□ -1.62
SNU71YGR013W SFK1P35735 353 aa4.9□□□□□ -1.63
SNU71YGR013W GLR1P41921 483 aaKnown RBP4.9□□□□□ -1.63
SNU71YGR013W TIM13P53299 105 aa4.9□□□□□ -1.63
SNU71YGR013W APS2Q00381 147 aa4.9□□□□□ -1.63
SNU71YGR013W YPL067CQ02754 198 aa4.9□□□□□ -1.63
SNU71YGR013W RNH202Q05635 350 aa4.9□□□□□ -1.63
SNU71YGR013W CNL1Q06333 122 aa4.9□□□□□ -1.63
SNU71YGR013W YOR342CQ12182 319 aa4.9□□□□□ -1.63
SNU71YGR013W NUM1Q00402 2748 aa4.89□□□□□ -1.63
SNU71YGR013W RPL2AP0CX45 254 aaKnown RBP4.89□□□□□ -1.63
SNU71YGR013W RPL2BP0CX46 254 aaKnown RBP4.89□□□□□ -1.63
SNU71YGR013W BET1P22804 142 aa4.89□□□□□ -1.63
SNU71YGR013W PEX34P25584 144 aa4.89□□□□□ -1.63
SNU71YGR013W STP22P25604 385 aa4.89□□□□□ -1.63
SNU71YGR013W CSH1P38287 376 aa4.89□□□□□ -1.63
SNU71YGR013W SNU13P39990 126 aaKnown RBP4.89□□□□□ -1.63
SNU71YGR013W PFS2P42841 465 aaKnown RBP4.89□□□□□ -1.63
SNU71YGR013W UBC7Q02159 165 aa4.89□□□□□ -1.63
SNU71YGR013W VPS28Q02767 242 aa4.89□□□□□ -1.63
SNU71YGR013W ELC1Q03071 99 aa4.89□□□□□ -1.63
SNU71YGR013W FCF1Q05498 189 aaPredicted RBP4.89□□□□□ -1.63
SNU71YGR013W TSC3Q3E790 80 aa4.89□□□□□ -1.63
SNU71YGR013W YFL012WP43580 148 aa4.88□□□□□ -1.63
SNU71YGR013W DAN1P47178 298 aa4.88□□□□□ -1.63
SNU71YGR013W ALG9P53868 555 aaKnown RBP4.88□□□□□ -1.63
SNU71YGR013W APJ1P53940 528 aa4.88□□□□□ -1.63
SNU71YGR013W MCH1Q07376 486 aa4.88□□□□□ -1.63
SNU71YGR013W YCR075W-AQ3E830 75 aa4.88□□□□□ -1.63
SNU71YGR013W HAP3P13434 144 aa4.88□□□□□ -1.63
SNU71YGR013W YGL088WP53151 121 aa4.88□□□□□ -1.63
SNU71YGR013W TMA23Q03525 211 aa4.88□□□□□ -1.63
SNU71YGR013W BEM2P39960 2167 aaKnown RBP4.88□□□□□ -1.63
SNU71YGR013W SEN1Q00416 2231 aaKnown RBP4.87□□□□□ -1.63
SNU71YGR013W SHE2P36068 246 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
SNU71YGR013W YEA6P39953 335 aa4.87□□□□□ -1.63
SNU71YGR013W ERJ5P43613 295 aaPredicted RBP4.87□□□□□ -1.63
SNU71YGR013W Q0255P03881 472 aa4.86□□□□□ -1.63
SNU71YGR013W ADH3P07246 375 aaKnown RBP4.86□□□□□ -1.63
SNU71YGR013W PBI2P0CT04 75 aaKnown RBP4.86□□□□□ -1.63
SNU71YGR013W YEL028WP39989 153 aa4.86□□□□□ -1.63
SNU71YGR013W BUD13P46947 266 aaPredicted RBP4.86□□□□□ -1.63
SNU71YGR013W SDT1P53078 280 aa4.86□□□□□ -1.63
SNU71YGR013W YDL180WQ12301 547 aa4.86□□□□□ -1.63
SNU71YGR013W PCL1P24867 279 aa4.86□□□□□ -1.63
SNU71YGR013W APQ12P40532 138 aa4.86□□□□□ -1.63
SNU71YGR013W TDA4P47153 279 aa4.86□□□□□ -1.63
SNU71YGR013W LSM3P57743 89 aaKnown RBP4.86□□□□□ -1.63
SNU71YGR013W DAD3P69850 94 aa4.86□□□□□ -1.63
SNU71YGR013W RAV2Q03956 351 aa4.86□□□□□ -1.63
SNU71YGR013W THI74Q04083 370 aa4.86□□□□□ -1.63
SNU71YGR013W CUE4Q04201 117 aaPredicted RBP4.86□□□□□ -1.63
SNU71YGR013W COA6Q3E846 104 aa4.86□□□□□ -1.63
SNU71YGR013W RIB3Q99258 208 aa4.86□□□□□ -1.63
SNU71YGR013W VAR1P02381 398 aa4.85□□□□□ -1.63
SNU71YGR013W URA5P13298 226 aaKnown RBP4.85□□□□□ -1.63
SNU71YGR013W MED6P38782 295 aa4.85□□□□□ -1.63
SNU71YGR013W YHR125WP38831 101 aa4.85□□□□□ -1.63
SNU71YGR013W YEA4P40004 342 aa4.85□□□□□ -1.63
SNU71YGR013W OST2P46964 130 aa4.85□□□□□ -1.63
SNU71YGR013W YJR015WP47090 510 aa4.85□□□□□ -1.63
SNU71YGR013W MED11Q99278 115 aa4.85□□□□□ -1.63
SNU71YGR013W ATP15P21306 62 aa4.84□□□□□ -1.63
SNU71YGR013W UPS3Q04006 179 aa4.84□□□□□ -1.63
SNU71YGR013W YMR320WQ04897 101 aa4.84□□□□□ -1.63
SNU71YGR013W SWC7Q06707 132 aa4.84□□□□□ -1.63
SNU71YGR013W PST2Q12335 198 aaKnown RBP4.84□□□□□ -1.63
SNU71YGR013W PEP8P40335 379 aa4.83□□□□□ -1.64
SNU71YGR013W YFR045WP43617 309 aa4.83□□□□□ -1.64
SNU71YGR013W YTH1Q06102 208 aaPredicted RBP4.83□□□□□ -1.64
SNU71YGR013W RAD28Q12021 506 aa4.83□□□□□ -1.64
SNU71YGR013W RPL13AQ12690 199 aaPredicted RBP4.83□□□□□ -1.64
SNU71YGR013W TIR1P10863 254 aa4.83□□□□□ -1.64
SNU71YGR013W MRP49P32388 137 aa4.83□□□□□ -1.64
SNU71YGR013W YOR062CP36025 268 aa4.83□□□□□ -1.64
SNU71YGR013W TTI2P47168 421 aa4.83□□□□□ -1.64
SNU71YGR013W PIN3Q06449 215 aa4.83□□□□□ -1.64
SNU71YGR013W YOL014WQ08110 124 aa4.83□□□□□ -1.64
SNU71YGR013W HPA3P39979 161 aa4.82□□□□□ -1.64
SNU71YGR013W YER188WP40103 239 aa4.82□□□□□ -1.64
SNU71YGR013W ARC15P40518 154 aaRIP-Chip data4.82□□□□□ -1.64not detected
SNU71YGR013W HSP26P15992 214 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
SNU71YGR013W YEL045CP32616 141 aa4.81□□□□□ -1.64
SNU71YGR013W FMT1P32785 401 aa4.81□□□□□ -1.64
SNU71YGR013W ATG8P38182 117 aaRIP-Chip data4.81□□□□□ -1.64not detected
SNU71YGR013W LSM2P38203 95 aaKnown RBP4.81□□□□□ -1.64
SNU71YGR013W YMR099CQ03161 297 aaKnown RBP4.81□□□□□ -1.64
SNU71YGR013W YMR030W-AQ3E760 96 aa4.81□□□□□ -1.64
SNU71YGR013W YML100W-AQ8TGT0 57 aa4.81□□□□□ -1.64
SNU71YGR013W YHR130CP38834 111 aa4.81□□□□□ -1.64
SNU71YGR013W MEP2P41948 499 aa4.81□□□□□ -1.64
SNU71YGR013W GON7P46984 123 aa4.81□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms