RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W YLR126CQ12288 251 aa3.92□□□□□ -1.78
VID30YGL227W ADH1P00330 348 aaKnown RBP3.91□□□□□ -1.78
VID30YGL227W PEX22P39718 180 aa3.91□□□□□ -1.78
VID30YGL227W MCM22P47167 239 aa3.91□□□□□ -1.78
VID30YGL227W FIT1Q04433 528 aa3.91□□□□□ -1.78
VID30YGL227W TIR4Q12218 487 aaPredicted RBP3.91□□□□□ -1.78
VID30YGL227W RPL9AP05738 191 aaKnown RBP3.91□□□□□ -1.78
VID30YGL227W DDI2P0CH63 225 aa3.91□□□□□ -1.78
VID30YGL227W DDI3P0CH64 225 aa3.91□□□□□ -1.78
VID30YGL227W CTR2P38865 189 aa3.91□□□□□ -1.78
VID30YGL227W KEG1P43614 200 aa3.91□□□□□ -1.78
VID30YGL227W TDA4P47153 279 aa3.91□□□□□ -1.78
VID30YGL227W FMP48P53233 369 aa3.91□□□□□ -1.78
VID30YGL227W ATG39Q06159 398 aa3.91□□□□□ -1.78
VID30YGL227W MCH1Q07376 486 aa3.91□□□□□ -1.78
VID30YGL227W IRA2P19158 3079 aa3.9□□□□□ -1.78
VID30YGL227W RPL28P02406 149 aaKnown RBP3.9□□□□□ -1.78
VID30YGL227W MRPL27P36526 146 aaPredicted RBP3.9□□□□□ -1.78
VID30YGL227W SER2P42941 309 aa3.9□□□□□ -1.78
VID30YGL227W ALG9P53868 555 aaKnown RBP3.9□□□□□ -1.78
VID30YGL227W VAM10Q08474 114 aa3.9□□□□□ -1.78
VID30YGL227W FSF1Q12029 327 aaKnown RBP3.9□□□□□ -1.78
VID30YGL227W FCY2P17064 533 aa3.9□□□□□ -1.79
VID30YGL227W SAP30P38429 201 aa3.9□□□□□ -1.79
VID30YGL227W PRR2Q12310 699 aa3.9□□□□□ -1.79
VID30YGL227W ATO3Q12359 275 aa3.9□□□□□ -1.79
VID30YGL227W SPT4P32914 102 aaPredicted RBP3.89□□□□□ -1.79
VID30YGL227W YPS5P53057 165 aa3.89□□□□□ -1.79
VID30YGL227W RPL2AP0CX45 254 aaKnown RBP3.89□□□□□ -1.79
VID30YGL227W RPL2BP0CX46 254 aaKnown RBP3.89□□□□□ -1.79
VID30YGL227W UMP1P38293 148 aa3.89□□□□□ -1.79
VID30YGL227W COS8P38723 381 aa3.89□□□□□ -1.79
VID30YGL227W ZEO1Q08245 113 aa3.89□□□□□ -1.79
VID30YGL227W YCR025CP25352 136 aa3.88□□□□□ -1.79
VID30YGL227W ACB1P31787 87 aa3.88□□□□□ -1.79
VID30YGL227W YRA2P36036 203 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
VID30YGL227W SHE2P36068 246 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
VID30YGL227W GEP4P38812 185 aa3.88□□□□□ -1.79
VID30YGL227W BOR1P53838 576 aa3.88□□□□□ -1.79
VID30YGL227W PKR1Q03880 122 aaKnown RBP3.88□□□□□ -1.79
VID30YGL227W YLR224WQ05947 369 aa3.88□□□□□ -1.79
VID30YGL227W RPB7P34087 171 aa3.88□□□□□ -1.79
VID30YGL227W SNF11P38956 169 aa3.88□□□□□ -1.79
VID30YGL227W SPI1P40092 148 aa3.88□□□□□ -1.79
VID30YGL227W HAC1P41546 238 aa3.88□□□□□ -1.79
VID30YGL227W YNL146C-AQ3E7Z1 64 aa3.88□□□□□ -1.79
VID30YGL227W COX12Q01519 83 aa3.88□□□□□ -1.79
VID30YGL227W CYC1P00044 109 aaPredicted RBP3.87□□□□□ -1.79
VID30YGL227W ERG24P32462 438 aaKnown RBP3.87□□□□□ -1.79
VID30YGL227W ERV15P38312 142 aa3.87□□□□□ -1.79
VID30YGL227W YAR068WP39564 161 aa3.87□□□□□ -1.79
VID30YGL227W PEX17P40155 199 aa3.87□□□□□ -1.79
VID30YGL227W SAE3P89114 91 aa3.87□□□□□ -1.79
VID30YGL227W MRS3P10566 314 aa3.87□□□□□ -1.79
VID30YGL227W SEC22P22214 214 aa3.87□□□□□ -1.79
VID30YGL227W YIL024CP40543 189 aa3.87□□□□□ -1.79
VID30YGL227W ERV29P53337 310 aa3.87□□□□□ -1.79
VID30YGL227W ATP23P53722 227 aa3.87□□□□□ -1.79
VID30YGL227W TIM18Q08749 192 aa3.87□□□□□ -1.79
VID30YGL227W YER039C-AP0CD97 72 aa3.86□□□□□ -1.79
VID30YGL227W AVT5P38176 459 aa3.86□□□□□ -1.79
VID30YGL227W POR2P40478 281 aa3.86□□□□□ -1.79
VID30YGL227W MED7Q08278 222 aa3.86□□□□□ -1.79
VID30YGL227W YOL160WQ08321 113 aa3.86□□□□□ -1.79
VID30YGL227W HUT1Q12520 339 aa3.86□□□□□ -1.79
VID30YGL227W VAR1P02381 398 aa3.86□□□□□ -1.79
VID30YGL227W ZRT1P32804 376 aa3.86□□□□□ -1.79
VID30YGL227W YNL234WP53857 426 aa3.86□□□□□ -1.79
VID30YGL227W BET5Q03630 159 aa3.86□□□□□ -1.79
VID30YGL227W SYM1Q06563 197 aa3.86□□□□□ -1.79
VID30YGL227W YPR010C-AA5Z2X5 72 aa3.85□□□□□ -1.79
VID30YGL227W RAS1P01119 309 aa3.85□□□□□ -1.79
VID30YGL227W YJR015WP47090 510 aa3.85□□□□□ -1.79
VID30YGL227W YCL001W-AP87012 153 aa3.85□□□□□ -1.79
VID30YGL227W CCW12Q12127 133 aa3.85□□□□□ -1.79
VID30YGL227W YOP1Q12402 180 aa3.85□□□□□ -1.79
VID30YGL227W SPS2P08459 502 aa3.85□□□□□ -1.79
VID30YGL227W LDS1P31379 325 aa3.85□□□□□ -1.79
VID30YGL227W ASI3P53983 676 aa3.85□□□□□ -1.79
VID30YGL227W YML122CQ03207 126 aa3.85□□□□□ -1.79
VID30YGL227W GLE2P40066 365 aa3.84□□□□□ -1.79
VID30YGL227W DOC1P53068 250 aa3.84□□□□□ -1.79
VID30YGL227W LSM7P53905 115 aaKnown RBP3.84□□□□□ -1.79
VID30YGL227W ODC1Q03028 310 aa3.84□□□□□ -1.79
VID30YGL227W YGR240C-AQ3E786 66 aa3.84□□□□□ -1.79
VID30YGL227W MDN1Q12019 4910 aaKnown RBP3.84□□□□□ -1.79
VID30YGL227W PCL1P24867 279 aa3.84□□□□□ -1.79
VID30YGL227W YCR041WP37265 110 aa3.84□□□□□ -1.79
VID30YGL227W SWM2P40342 146 aa3.84□□□□□ -1.79
VID30YGL227W TMA23Q03525 211 aa3.84□□□□□ -1.79
VID30YGL227W SDH7Q04401 133 aa3.84□□□□□ -1.79
VID30YGL227W LCB3P47013 409 aa3.84□□□□□ -1.8
VID30YGL227W ERV14P53173 138 aa3.84□□□□□ -1.8
VID30YGL227W THI74Q04083 370 aa3.84□□□□□ -1.8
VID30YGL227W IGO2Q9P305 131 aa3.84□□□□□ -1.8
VID30YGL227W RPS11AP0CX47 156 aaKnown RBP3.83□□□□□ -1.8
VID30YGL227W RPS11BP0CX48 156 aaKnown RBP3.83□□□□□ -1.8
VID30YGL227W RPF1P38805 295 aaKnown RBP3.83□□□□□ -1.8
VID30YGL227W YNL200CP40165 246 aaKnown RBP3.83□□□□□ -1.8
VID30YGL227W TIR3P40552 269 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms