RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W ZEO1Q08245 113 aa3.17□□□□□ -1.9
DEG1YFL001W GTT2Q12390 233 aa3.17□□□□□ -1.9
DEG1YFL001W YLR361C-AQ3E795 98 aa3.17□□□□□ -1.9
DEG1YFL001W YOR304C-AO14468 76 aa3.16□□□□□ -1.9
DEG1YFL001W CPA1P07258 411 aaKnown RBP3.16□□□□□ -1.9
DEG1YFL001W PAN3P36102 679 aaPredicted RBP3.16□□□□□ -1.9
DEG1YFL001W RPL33BP41056 107 aaKnown RBP3.16□□□□□ -1.9
DEG1YFL001W CIS3P47001 227 aa3.16□□□□□ -1.9
DEG1YFL001W MRPS8Q03799 155 aa3.16□□□□□ -1.9
DEG1YFL001W PKR1Q03880 122 aaKnown RBP3.16□□□□□ -1.9
DEG1YFL001W PRP11Q07350 266 aaPredicted RBP3.16□□□□□ -1.9
DEG1YFL001W FSF1Q12029 327 aaKnown RBP3.16□□□□□ -1.9
DEG1YFL001W YOR342CQ12182 319 aa3.16□□□□□ -1.9
DEG1YFL001W ATP14Q12349 124 aa3.16□□□□□ -1.9
DEG1YFL001W EMC6Q12431 108 aa3.16□□□□□ -1.9
DEG1YFL001W YIR021W-AQ3E739 70 aa3.16□□□□□ -1.9
DEG1YFL001W YML100W-AQ8TGT0 57 aa3.16□□□□□ -1.9
DEG1YFL001W SCL1P21243 252 aaKnown RBP3.15□□□□□ -1.91
DEG1YFL001W YCR099CP25657 155 aa3.15□□□□□ -1.91
DEG1YFL001W BUB2P26448 306 aaPredicted RBP3.15□□□□□ -1.91
DEG1YFL001W YOR062CP36025 268 aa3.15□□□□□ -1.91
DEG1YFL001W MRPL24P36525 258 aaPredicted RBP3.15□□□□□ -1.91
DEG1YFL001W BOL2P53082 120 aa3.15□□□□□ -1.91
DEG1YFL001W NAT3Q06504 195 aa3.15□□□□□ -1.91
DEG1YFL001W YMR030W-AQ3E760 96 aa3.15□□□□□ -1.91
DEG1YFL001W FAB1P34756 2278 aa3.14□□□□□ -1.91
DEG1YFL001W YAR023CD6VPM8 179 aa3.14□□□□□ -1.91
DEG1YFL001W SPO13P23624 291 aa3.14□□□□□ -1.91
DEG1YFL001W SRL3P36167 246 aa3.14□□□□□ -1.91
DEG1YFL001W NSG1P38837 291 aa3.14□□□□□ -1.91
DEG1YFL001W RFC2P40348 353 aa3.14□□□□□ -1.91
DEG1YFL001W GPI14P47088 403 aaKnown RBP3.14□□□□□ -1.91
DEG1YFL001W RBL2P48606 106 aaKnown RBP3.14□□□□□ -1.91
DEG1YFL001W DAD3P69850 94 aa3.14□□□□□ -1.91
DEG1YFL001W UBC7Q02159 165 aa3.14□□□□□ -1.91
DEG1YFL001W MIX17Q03667 156 aa3.14□□□□□ -1.91
DEG1YFL001W YMR253CQ04835 414 aa3.14□□□□□ -1.91
DEG1YFL001W ATG10Q07879 167 aa3.14□□□□□ -1.91
DEG1YFL001W DGK1Q12382 290 aa3.14□□□□□ -1.91
DEG1YFL001W YLR412C-AQ3E742 68 aa3.14□□□□□ -1.91
DEG1YFL001W TOR2P32600 2474 aaKnown RBP3.13□□□□□ -1.91
DEG1YFL001W RPC19P28000 142 aaKnown RBP3.13□□□□□ -1.91
DEG1YFL001W UBC8P28263 218 aa3.13□□□□□ -1.91
DEG1YFL001W PEX4P29340 183 aa3.13□□□□□ -1.91
DEG1YFL001W SRX1P36077 127 aa3.13□□□□□ -1.91
DEG1YFL001W YBR032WP38223 100 aa3.13□□□□□ -1.91
DEG1YFL001W ERV15P38312 142 aa3.13□□□□□ -1.91
DEG1YFL001W PRS3P38689 320 aaKnown RBP3.13□□□□□ -1.91
DEG1YFL001W VTC1P40046 129 aaRIP-Chip data3.13□□□□□ -1.91not detected
DEG1YFL001W YFL019CP43576 117 aa3.13□□□□□ -1.91
DEG1YFL001W LSM8P47093 109 aaKnown RBP3.13□□□□□ -1.91
DEG1YFL001W APS2Q00381 147 aa3.13□□□□□ -1.91
DEG1YFL001W YDR476CQ03362 224 aa3.13□□□□□ -1.91
DEG1YFL001W RAV2Q03956 351 aa3.13□□□□□ -1.91
DEG1YFL001W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
DEG1YFL001W POR1P04840 283 aaKnown RBP3.12□□□□□ -1.91
DEG1YFL001W YGL041W-AP0C5N3 154 aa3.12□□□□□ -1.91
DEG1YFL001W RPS1BP23248 255 aaKnown RBP3.12□□□□□ -1.91
DEG1YFL001W YCR023CP25351 611 aa3.12□□□□□ -1.91
DEG1YFL001W SHE2P36068 246 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
DEG1YFL001W VMA7P39111 118 aa3.12□□□□□ -1.91
DEG1YFL001W TIR3P40552 269 aa3.12□□□□□ -1.91
DEG1YFL001W PAC10P48363 199 aa3.12□□□□□ -1.91
DEG1YFL001W SOL1P50278 321 aa3.12□□□□□ -1.91
DEG1YFL001W LSM3P57743 89 aaKnown RBP3.12□□□□□ -1.91
DEG1YFL001W YDL180WQ12301 547 aa3.12□□□□□ -1.91
DEG1YFL001W BEM2P39960 2167 aaKnown RBP3.11□□□□□ -1.91
DEG1YFL001W MSB2P32334 1306 aa3.11□□□□□ -1.91
DEG1YFL001W MDM35O60200 86 aa3.11□□□□□ -1.91
DEG1YFL001W TTI2P47168 421 aa3.11□□□□□ -1.91
DEG1YFL001W MPA43P53583 542 aaPredicted RBP3.11□□□□□ -1.91
DEG1YFL001W YNR077CP53758 84 aa3.11□□□□□ -1.91
DEG1YFL001W YMR099CQ03161 297 aaKnown RBP3.11□□□□□ -1.91
DEG1YFL001W HRD1Q08109 551 aa3.11□□□□□ -1.91
DEG1YFL001W PST2Q12335 198 aaKnown RBP3.11□□□□□ -1.91
DEG1YFL001W PBI2P0CT04 75 aaKnown RBP3.1□□□□□ -1.91
DEG1YFL001W IPI1P38803 334 aaPredicted RBP3.1□□□□□ -1.91
DEG1YFL001W SVP26P38869 228 aa3.1□□□□□ -1.91
DEG1YFL001W YEL073CP39974 107 aa3.1□□□□□ -1.91
DEG1YFL001W YAE1P47118 141 aaPredicted RBP3.1□□□□□ -1.91
DEG1YFL001W XPT1P47165 209 aa3.1□□□□□ -1.91
DEG1YFL001W MPC3P53311 146 aa3.1□□□□□ -1.91
DEG1YFL001W VPS71Q03433 280 aa3.1□□□□□ -1.91
DEG1YFL001W ATG40Q99325 256 aa3.1□□□□□ -1.91
DEG1YFL001W FMP27Q06179 2628 aa3.09□□□□□ -1.91
DEG1YFL001W UTR5P32630 166 aa3.09□□□□□ -1.91
DEG1YFL001W MRPL15P36523 253 aa3.09□□□□□ -1.91
DEG1YFL001W YPT31P38555 223 aaKnown RBP3.09□□□□□ -1.91
DEG1YFL001W ERJ5P43613 295 aaPredicted RBP3.09□□□□□ -1.91
DEG1YFL001W YJL027CP47063 138 aaPredicted RBP3.09□□□□□ -1.91
DEG1YFL001W CGI121Q03705 181 aaKnown RBP3.09□□□□□ -1.91
DEG1YFL001W FMN1Q03778 218 aa3.09□□□□□ -1.91
DEG1YFL001W YNL217WP40152 326 aa3.08□□□□□ -1.92
DEG1YFL001W MRP49P32388 137 aa3.07□□□□□ -1.92
DEG1YFL001W HYM1P32464 399 aa3.07□□□□□ -1.92
DEG1YFL001W SLM6P38343 150 aa3.07□□□□□ -1.92
DEG1YFL001W RPS12P48589 143 aaKnown RBP3.07□□□□□ -1.92
DEG1YFL001W YGL101WP53144 215 aa3.07□□□□□ -1.92
DEG1YFL001W THI74Q04083 370 aa3.07□□□□□ -1.92
DEG1YFL001W CNL1Q06333 122 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms