RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	YOR292C	Q08743	309 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YOR097C	Q12274	175 aa	Predicted RBP	3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YPR071W	Q12346	211 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	CDC43	P18898	376 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	HED1	Q03937	162 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YDL242W	Q07746	117 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	TEN1	Q07921	160 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	CRC1	Q12289	327 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	PEP1	P32319	1579 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YJR120W	P47157	116 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	RPL38	P49167	78 aa	Known RBP	3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YGL235W	P53071	178 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YPL229W	Q99395	206 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	KOG1	P38873	1557 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	RME1	P32338	300 aa	Known RBP	3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	MTR2	P34232	184 aa	Known RBP	3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YHL018W	P38744	120 aa	Predicted RBP	3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YFR054C	P43622	192 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YDL218W	Q07629	317 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	YHR214C-E	Q8TGK0	99 aa		3.91	□□□□□ -1.78
YDR261C-D	YDR261C-D	ERV1	P27882	189 aa		3.9	□□□□□ -1.78
YDR261C-D	YDR261C-D	PRE2	P30656	287 aa	Known RBP	3.9	□□□□□ -1.78
YDR261C-D	YDR261C-D	SLM3	Q12093	417 aa		3.9	□□□□□ -1.78
YDR261C-D	YDR261C-D	MRH1	Q12117	320 aa	Predicted RBP	3.9	□□□□□ -1.78
YDR261C-D	YDR261C-D	REV3	P14284	1504 aa		3.9	□□□□□ -1.78
YDR261C-D	YDR261C-D	YBR032W	P38223	100 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	MRPL49	P40858	161 aa	Predicted RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	YCL021W-A	Q96VH3	125 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	PRY3	P47033	881 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	VEL1	P53058	206 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	CRH1	P53301	507 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	SMX3	P54999	86 aa	Predicted RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	IRC13	Q08630	104 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	RDL1	Q12305	139 aa	Known RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	SNQ2	P32568	1501 aa	Known RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	CPR1	P14832	162 aa	Known RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	SEC11	P15367	167 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	SLM6	P38343	150 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	RPS14B	P39516	138 aa	Known RBP	3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	TAX4	P47030	604 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	SCW11	P53189	542 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	YPR145C-A	Q2V2P0	78 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	YOR381W-A	Q3E804	55 aa		3.9	□□□□□ -1.79
YDR261C-D	YDR261C-D	MXR2	P25566	168 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	RCR2	Q03446	210 aa	Known RBP	3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	FSH2	Q05015	223 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	HAP1	P0CE41	1502 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YBL059W	P34224	193 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YHP1	Q04116	353 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YMR030W-A	Q3E760	96 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	ANS1	P38832	159 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YIR020C	P40575	100 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YJL118W	P47022	219 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YJL028W	P47062	111 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	YKL065W-A	Q2V2P2	73 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	OST5	Q92316	86 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	PDR10	P51533	1564 aa		3.89	□□□□□ -1.79
YDR261C-D	YDR261C-D	SDH2	P21801	266 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	ARC15	P40518	154 aa	RIP-Chip data	3.88	□□□□□ -1.79	not detected
YDR261C-D	YDR261C-D	MPC3	P53311	146 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	GAS5	Q08193	484 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	YDR157W	A0A023PZE8	133 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	YHR139C-A	O13536	103 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	YPR096C	O13587	100 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	CUP2	P15315	225 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	SIM1	P40472	476 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	NCA3	P46955	337 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	MTL1	P53214	551 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	HST4	P53688	370 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	DNA2	P38859	1522 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	TY3B-G	Q99315	1547 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	UBC4	P15731	148 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	ATS1	P31386	333 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	MPC2	P38857	129 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	TVP23	P38962	199 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	YER079W	P40052	210 aa	Known RBP	3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	AIM19	P40502	157 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	GRX8	Q05926	109 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	NCE102	Q12207	173 aa	RIP-Chip data	3.88	□□□□□ -1.79	not detected
YDR261C-D	YDR261C-D	SOD1	P00445	154 aa	Known RBP	3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	YLR194C	Q05777	254 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
YDR261C-D	YDR261C-D	YDL009C	Q12210	107 aa		3.88	□□□□□ -1.79
YDR261C-D	YDR261C-D	ERS1	P17261	260 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	FZF1	P32805	299 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YER135C	P40082	130 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	SFT1	P43682	97 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	MBR1	P23493	339 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	BET5	Q03630	159 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YMR254C	Q04838	102 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YCR095W-A	Q3E787	52 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YCF1	P39109	1515 aa	Known RBP	3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	PDR12	Q02785	1511 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YAR068W	P39564	161 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YCH1	P42937	148 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YFL051C	P43552	160 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	MSO1	P53604	210 aa	Known RBP	3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	SPR6	Q01684	191 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YLR296W	Q05898	108 aa		3.87	□□□□□ -1.79
YDR261C-D	YDR261C-D	YOR343C	Q12484	108 aa		3.87	□□□□□ -1.79

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