RNA–Protein interactions for RNA: YDL190C

UFD2, Transcript of Ubiquitin chain assembly factor (E4), yeastyeast

Gene UFD2, Length 2,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD2YDL190C THI74Q04083 370 aa0.93□□□□□ -2.26
UFD2YDL190C FSF1Q12029 327 aaKnown RBP0.93□□□□□ -2.26
UFD2YDL190C DGK1Q12382 290 aa0.93□□□□□ -2.26
UFD2YDL190C ODC2Q99297 307 aa0.93□□□□□ -2.26
UFD2YDL190C YAR023CD6VPM8 179 aa0.92□□□□□ -2.26
UFD2YDL190C RAS2P01120 322 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C POR1P04840 283 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C CPA1P07258 411 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C RPL30P14120 105 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C STP22P25604 385 aa0.92□□□□□ -2.26
UFD2YDL190C SRX1P36077 127 aa0.92□□□□□ -2.26
UFD2YDL190C FCY21P40039 528 aa0.92□□□□□ -2.26
UFD2YDL190C XPT1P47165 209 aa0.92□□□□□ -2.26
UFD2YDL190C DAN1P47178 298 aa0.92□□□□□ -2.26
UFD2YDL190C YMR099CQ03161 297 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C NAT3Q06504 195 aa0.92□□□□□ -2.26
UFD2YDL190C DAS2Q12084 232 aa0.92□□□□□ -2.26
UFD2YDL190C YDL180WQ12301 547 aa0.92□□□□□ -2.26
UFD2YDL190C PST2Q12335 198 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C PRS3P38689 320 aaKnown RBP0.92□□□□□ -2.26
UFD2YDL190C YHR022CP38763 256 aa0.92□□□□□ -2.26
UFD2YDL190C YNL217WP40152 326 aa0.92□□□□□ -2.26
UFD2YDL190C DLS1P40366 167 aa0.92□□□□□ -2.26
UFD2YDL190C TTI2P47168 421 aa0.92□□□□□ -2.26
UFD2YDL190C ERG25P53045 309 aa0.92□□□□□ -2.26
UFD2YDL190C ORM1P53224 222 aa0.92□□□□□ -2.26
UFD2YDL190C TIM13P53299 105 aa0.92□□□□□ -2.26
UFD2YDL190C RCF2P53721 224 aa0.92□□□□□ -2.26
UFD2YDL190C CYT2Q00873 224 aa0.92□□□□□ -2.26
UFD2YDL190C FMN1Q03778 218 aa0.92□□□□□ -2.26
UFD2YDL190C RIB3Q99258 208 aa0.92□□□□□ -2.26
UFD2YDL190C CSH1P38287 376 aa0.91□□□□□ -2.26
UFD2YDL190C SVP26P38869 228 aa0.91□□□□□ -2.26
UFD2YDL190C VTC1P40046 129 aaRIP-Chip data0.91□□□□□ -2.26not detected
UFD2YDL190C YPL073CP40323 161 aa0.91□□□□□ -2.26
UFD2YDL190C YFL019CP43576 117 aa0.91□□□□□ -2.26
UFD2YDL190C MPC3P53311 146 aa0.91□□□□□ -2.26
UFD2YDL190C HHO1P53551 258 aa0.91□□□□□ -2.26
UFD2YDL190C YMR321CQ04898 105 aa0.91□□□□□ -2.26
UFD2YDL190C YLR412C-AQ3E742 68 aa0.91□□□□□ -2.26
UFD2YDL190C ATG40Q99325 256 aa0.91□□□□□ -2.26
UFD2YDL190C CCC1P47818 322 aa0.91□□□□□ -2.26
UFD2YDL190C VPS71Q03433 280 aa0.91□□□□□ -2.26
UFD2YDL190C HRD1Q08109 551 aa0.91□□□□□ -2.26
UFD2YDL190C ATP5P09457 212 aa0.9□□□□□ -2.26
UFD2YDL190C DDI2P0CH63 225 aa0.9□□□□□ -2.26
UFD2YDL190C DDI3P0CH64 225 aa0.9□□□□□ -2.26
UFD2YDL190C NSP1P14907 823 aaKnown RBP0.9□□□□□ -2.26
UFD2YDL190C FZF1P32805 299 aa0.9□□□□□ -2.26
UFD2YDL190C SHE2P36068 246 aaKnown RBP RIP-Chip data0.9□□□□□ -2.26not detected
UFD2YDL190C GLR1P41921 483 aaKnown RBP0.9□□□□□ -2.26
UFD2YDL190C YFR054CP43622 192 aa0.9□□□□□ -2.26
UFD2YDL190C COF1Q03048 143 aaKnown RBP0.9□□□□□ -2.26
UFD2YDL190C YMR320WQ04897 101 aa0.9□□□□□ -2.26
UFD2YDL190C YDR278CQ05612 105 aa0.9□□□□□ -2.26
UFD2YDL190C YPD1Q07688 167 aa0.9□□□□□ -2.26
UFD2YDL190C SLO1Q3E784 85 aa0.9□□□□□ -2.26
UFD2YDL190C FMP27Q06179 2628 aa0.9□□□□□ -2.26
UFD2YDL190C YLR236CA0A023PZG4 107 aa0.9□□□□□ -2.27
UFD2YDL190C TIR1P10863 254 aa0.9□□□□□ -2.27
UFD2YDL190C RPC19P28000 142 aaKnown RBP0.9□□□□□ -2.27
UFD2YDL190C PTC1P35182 281 aa0.9□□□□□ -2.27
UFD2YDL190C GLC8P41818 229 aa0.9□□□□□ -2.27
UFD2YDL190C ERJ5P43613 295 aaPredicted RBP0.9□□□□□ -2.27
UFD2YDL190C FIP1P45976 327 aa0.9□□□□□ -2.27
UFD2YDL190C YGL193CP53097 103 aa0.9□□□□□ -2.27
UFD2YDL190C TIM8P57744 87 aa0.9□□□□□ -2.27
UFD2YDL190C YDR366CP87287 132 aa0.9□□□□□ -2.27
UFD2YDL190C YMR295CQ03559 197 aa0.9□□□□□ -2.27
UFD2YDL190C SDH7Q04401 133 aa0.9□□□□□ -2.27
UFD2YDL190C ATP14Q12349 124 aa0.9□□□□□ -2.27
UFD2YDL190C WIP1Q2V2P8 89 aa0.9□□□□□ -2.27
UFD2YDL190C Q0144Q9ZZW2 109 aa0.9□□□□□ -2.27
UFD2YDL190C YBR209WP38311 105 aa0.9□□□□□ -2.27
UFD2YDL190C GAA1P39012 614 aa0.9□□□□□ -2.27
UFD2YDL190C APS3P47064 194 aa0.9□□□□□ -2.27
UFD2YDL190C SBH1P52870 82 aa0.9□□□□□ -2.27
UFD2YDL190C VPS28Q02767 242 aa0.9□□□□□ -2.27
UFD2YDL190C FRQ1Q06389 190 aa0.9□□□□□ -2.27
UFD2YDL190C FYV12Q08559 129 aa0.9□□□□□ -2.27
UFD2YDL190C YOR214CQ12282 236 aa0.9□□□□□ -2.27
UFD2YDL190C SRP21P32342 167 aa0.89□□□□□ -2.27
UFD2YDL190C NRG2P38082 220 aa0.89□□□□□ -2.27
UFD2YDL190C DSE2P38844 325 aa0.89□□□□□ -2.27
UFD2YDL190C SPC25P40014 221 aa0.89□□□□□ -2.27
UFD2YDL190C CUP9P41817 306 aa0.89□□□□□ -2.27
UFD2YDL190C GPI2P46961 280 aa0.89□□□□□ -2.27
UFD2YDL190C YGR039WP53225 103 aa0.89□□□□□ -2.27
UFD2YDL190C DIG2Q03373 323 aaKnown RBP0.89□□□□□ -2.27
UFD2YDL190C SHH3Q04487 196 aa0.89□□□□□ -2.27
UFD2YDL190C GAL83Q04739 417 aa0.89□□□□□ -2.27
UFD2YDL190C SML1Q04964 104 aa0.89□□□□□ -2.27
UFD2YDL190C CNL1Q06333 122 aa0.89□□□□□ -2.27
UFD2YDL190C PRP11Q07350 266 aaPredicted RBP0.89□□□□□ -2.27
UFD2YDL190C YHR086W-AQ3E746 53 aa0.89□□□□□ -2.27
UFD2YDL190C HSP30P25619 332 aa0.89□□□□□ -2.27
UFD2YDL190C SUI1P32911 108 aaKnown RBP0.89□□□□□ -2.27
UFD2YDL190C RPS1AP33442 255 aaKnown RBP0.89□□□□□ -2.27
UFD2YDL190C CPR5P35176 225 aa0.89□□□□□ -2.27
UFD2YDL190C PAM17P36147 197 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms