RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W NEJ1Q06148 342 aa1.04□□□□□ -2.24
MSH5YDL154W VPS68Q12016 184 aa1.04□□□□□ -2.24
MSH5YDL154W YCR023CP25351 611 aa1.03□□□□□ -2.24
MSH5YDL154W MRP49P32388 137 aa1.03□□□□□ -2.24
MSH5YDL154W MRPL11P36521 249 aaPredicted RBP1.03□□□□□ -2.24
MSH5YDL154W ETR1P38071 380 aa1.03□□□□□ -2.24
MSH5YDL154W HSP10P38910 106 aa1.03□□□□□ -2.24
MSH5YDL154W GLC8P41818 229 aa1.03□□□□□ -2.24
MSH5YDL154W YJR015WP47090 510 aa1.03□□□□□ -2.24
MSH5YDL154W RPS12P48589 143 aaKnown RBP1.03□□□□□ -2.24
MSH5YDL154W YIP3P53633 176 aa1.03□□□□□ -2.24
MSH5YDL154W PDR17P53844 350 aa1.03□□□□□ -2.24
MSH5YDL154W NUP49Q02199 472 aa1.03□□□□□ -2.24
MSH5YDL154W SWC7Q06707 132 aa1.03□□□□□ -2.24
MSH5YDL154W LDB18Q07887 179 aa1.03□□□□□ -2.24
MSH5YDL154W YLR361C-AQ3E795 98 aa1.03□□□□□ -2.24
MSH5YDL154W YLR099W-AQ3E798 87 aa1.03□□□□□ -2.24
MSH5YDL154W YKL068W-AQ3E826 78 aa1.03□□□□□ -2.24
MSH5YDL154W YPR014CQ6B0W2 109 aa1.03□□□□□ -2.24
MSH5YDL154W GPA2P10823 449 aa1.03□□□□□ -2.24
MSH5YDL154W TIR1P10863 254 aa1.03□□□□□ -2.24
MSH5YDL154W YBR285WP38354 144 aa1.03□□□□□ -2.24
MSH5YDL154W FYV4P38783 130 aaPredicted RBP1.03□□□□□ -2.24
MSH5YDL154W VTC1P40046 129 aaRIP-Chip data1.03□□□□□ -2.24not detected
MSH5YDL154W GLE2P40066 365 aa1.03□□□□□ -2.24
MSH5YDL154W POG1P40473 351 aa1.03□□□□□ -2.24
MSH5YDL154W ERJ5P43613 295 aaPredicted RBP1.03□□□□□ -2.24
MSH5YDL154W IRC18P47056 224 aa1.03□□□□□ -2.24
MSH5YDL154W CAB4P53332 305 aa1.03□□□□□ -2.24
MSH5YDL154W RCE1Q03530 315 aa1.03□□□□□ -2.24
MSH5YDL154W CGI121Q03705 181 aaKnown RBP1.03□□□□□ -2.24
MSH5YDL154W YOR283WQ12040 230 aaKnown RBP1.03□□□□□ -2.24
MSH5YDL154W ATP14Q12349 124 aa1.03□□□□□ -2.24
MSH5YDL154W DGK1Q12382 290 aa1.03□□□□□ -2.24
MSH5YDL154W YCL012CQ8J0M4 134 aa1.03□□□□□ -2.24
MSH5YDL154W YHR214C-EQ8TGK0 99 aa1.03□□□□□ -2.24
MSH5YDL154W SEC17P32602 292 aa1.02□□□□□ -2.25
MSH5YDL154W SNC2P33328 115 aa1.02□□□□□ -2.25
MSH5YDL154W PAN3P36102 679 aaPredicted RBP1.02□□□□□ -2.25
MSH5YDL154W EDC3P39998 551 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W APQ12P40532 138 aa1.02□□□□□ -2.25
MSH5YDL154W YKE4P40544 346 aa1.02□□□□□ -2.25
MSH5YDL154W RPA43P46669 326 aa1.02□□□□□ -2.25
MSH5YDL154W MMS2P53152 137 aa1.02□□□□□ -2.25
MSH5YDL154W JAC1P53193 184 aa1.02□□□□□ -2.25
MSH5YDL154W ELC1Q03071 99 aa1.02□□□□□ -2.25
MSH5YDL154W HPT1Q04178 221 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W GRX8Q05926 109 aa1.02□□□□□ -2.25
MSH5YDL154W YLR046CQ12253 270 aa1.02□□□□□ -2.25
MSH5YDL154W GTT2Q12390 233 aa1.02□□□□□ -2.25
MSH5YDL154W RPL13AQ12690 199 aaPredicted RBP1.02□□□□□ -2.25
MSH5YDL154W IGO2Q9P305 131 aa1.02□□□□□ -2.25
MSH5YDL154W YHR139C-AO13536 103 aa1.02□□□□□ -2.25
MSH5YDL154W YLR156WP0CE96 114 aa1.02□□□□□ -2.25
MSH5YDL154W YLR159WP0CE97 114 aa1.02□□□□□ -2.25
MSH5YDL154W YLR161WP0CE98 114 aa1.02□□□□□ -2.25
MSH5YDL154W GCY1P14065 312 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
MSH5YDL154W PHO13P19881 312 aa1.02□□□□□ -2.25
MSH5YDL154W TAH1P25638 111 aaPredicted RBP1.02□□□□□ -2.25
MSH5YDL154W RFA3P26755 122 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W RPA12P32529 125 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W SHE2P36068 246 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
MSH5YDL154W RPS20P38701 121 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W YNL200CP40165 246 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W BMT5P40493 336 aa1.02□□□□□ -2.25
MSH5YDL154W TTI2P47168 421 aa1.02□□□□□ -2.25
MSH5YDL154W MPA43P53583 542 aaPredicted RBP1.02□□□□□ -2.25
MSH5YDL154W YNL033WP53964 284 aa1.02□□□□□ -2.25
MSH5YDL154W YNL019CP53975 284 aa1.02□□□□□ -2.25
MSH5YDL154W FIT1Q04433 528 aa1.02□□□□□ -2.25
MSH5YDL154W UPS1Q05776 175 aa1.02□□□□□ -2.25
MSH5YDL154W STT4P37297 1900 aa1.02□□□□□ -2.25
MSH5YDL154W PET9P18239 318 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W MAG1P22134 296 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W HYP2P23301 157 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W IPT1P38954 527 aa1.02□□□□□ -2.25
MSH5YDL154W RPL33BP41056 107 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W RCF2P53721 224 aa1.02□□□□□ -2.25
MSH5YDL154W YDR391CQ04170 232 aa1.02□□□□□ -2.25
MSH5YDL154W CNL1Q06333 122 aa1.02□□□□□ -2.25
MSH5YDL154W PAU23Q07987 124 aa1.02□□□□□ -2.25
MSH5YDL154W YPL162CQ12042 273 aa1.02□□□□□ -2.25
MSH5YDL154W PST2Q12335 198 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W YLR118CQ12354 227 aa1.02□□□□□ -2.25
MSH5YDL154W PAU17Q12370 124 aa1.02□□□□□ -2.25
MSH5YDL154W DDP1Q99321 188 aaKnown RBP1.02□□□□□ -2.25
MSH5YDL154W YPL229WQ99395 206 aa1.02□□□□□ -2.25
MSH5YDL154W YOR304C-AO14468 76 aa1.01□□□□□ -2.25
MSH5YDL154W SNF4P12904 322 aa1.01□□□□□ -2.25
MSH5YDL154W CKS1P20486 150 aaKnown RBP1.01□□□□□ -2.25
MSH5YDL154W SRB6P32570 121 aa1.01□□□□□ -2.25
MSH5YDL154W RPL13BP40212 199 aaKnown RBP1.01□□□□□ -2.25
MSH5YDL154W PGD1P40356 397 aa1.01□□□□□ -2.25
MSH5YDL154W GPI2P46961 280 aa1.01□□□□□ -2.25
MSH5YDL154W AIM25P47140 327 aa1.01□□□□□ -2.25
MSH5YDL154W TDA4P47153 279 aa1.01□□□□□ -2.25
MSH5YDL154W DAN1P47178 298 aa1.01□□□□□ -2.25
MSH5YDL154W YGL230CP53074 147 aa1.01□□□□□ -2.25
MSH5YDL154W RSM19P53733 91 aaPredicted RBP1.01□□□□□ -2.25
MSH5YDL154W GRX5Q02784 150 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms