RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W ERG2P32352 222 aa3.63□□□□□ -1.83
KIN28YDL108W VMA11P32842 164 aa3.63□□□□□ -1.83
KIN28YDL108W PGU1P47180 361 aa3.63□□□□□ -1.83
KIN28YDL108W YGL262WP53054 175 aa3.63□□□□□ -1.83
KIN28YDL108W SPG3Q04398 127 aaPredicted RBP3.63□□□□□ -1.83
KIN28YDL108W NIP7Q08962 181 aaKnown RBP3.63□□□□□ -1.83
KIN28YDL108W ESP1Q03018 1630 aa3.62□□□□□ -1.83
KIN28YDL108W NUP159P40477 1460 aa3.62□□□□□ -1.83
KIN28YDL108W TY1B-JR2P47100 1755 aaKnown RBP3.62□□□□□ -1.83
KIN28YDL108W TY1B-ER2Q03619 1755 aa3.62□□□□□ -1.83
KIN28YDL108W TY1B-MR1Q04214 1755 aa3.62□□□□□ -1.83
KIN28YDL108W TY1B-MR2Q04670 1755 aaKnown RBP3.62□□□□□ -1.83
KIN28YDL108W TY1B-LR1Q12088 1755 aaKnown RBP3.62□□□□□ -1.83
KIN28YDL108W TY1B-NL1Q12112 1755 aa3.62□□□□□ -1.83
KIN28YDL108W TY1B-GR1Q12141 1755 aa3.62□□□□□ -1.83
KIN28YDL108W TY1B-BLQ12490 1755 aa3.62□□□□□ -1.83
KIN28YDL108W HMRA1P0CY11 126 aa3.62□□□□□ -1.83
KIN28YDL108W URA5P13298 226 aaKnown RBP3.62□□□□□ -1.83
KIN28YDL108W TMA19P35691 167 aaKnown RBP3.62□□□□□ -1.83
KIN28YDL108W MSA2P36157 363 aa3.62□□□□□ -1.83
KIN28YDL108W MIX23P38162 196 aa3.62□□□□□ -1.83
KIN28YDL108W YFL019CP43576 117 aa3.62□□□□□ -1.83
KIN28YDL108W EMI1Q04406 187 aa3.62□□□□□ -1.83
KIN28YDL108W RRT7Q07829 113 aa3.62□□□□□ -1.83
KIN28YDL108W NOP1P15646 327 aaKnown RBP3.61□□□□□ -1.83
KIN28YDL108W UBC4P15731 148 aa3.61□□□□□ -1.83
KIN28YDL108W ZRT3P34240 503 aa3.61□□□□□ -1.83
KIN28YDL108W YAR068WP39564 161 aa3.61□□□□□ -1.83
KIN28YDL108W NSA2P40078 261 aaKnown RBP3.61□□□□□ -1.83
KIN28YDL108W NCA3P46955 337 aa3.61□□□□□ -1.83
KIN28YDL108W HAL1Q01766 294 aa3.61□□□□□ -1.83
KIN28YDL108W YPR174CQ06616 221 aaPredicted RBP3.61□□□□□ -1.83
KIN28YDL108W RAS2P01120 322 aaKnown RBP3.6□□□□□ -1.83
KIN28YDL108W YLR156WP0CE96 114 aa3.6□□□□□ -1.83
KIN28YDL108W YLR159WP0CE97 114 aa3.6□□□□□ -1.83
KIN28YDL108W YLR161WP0CE98 114 aa3.6□□□□□ -1.83
KIN28YDL108W HPA3P39979 161 aa3.6□□□□□ -1.83
KIN28YDL108W YEL028WP39989 153 aa3.6□□□□□ -1.83
KIN28YDL108W YNL208WP40159 199 aaKnown RBP3.6□□□□□ -1.83
KIN28YDL108W ANT1Q06497 328 aa3.6□□□□□ -1.83
KIN28YDL108W FYV12Q08559 129 aa3.6□□□□□ -1.83
KIN28YDL108W YDR029WQ12111 104 aa3.6□□□□□ -1.83
KIN28YDL108W YER078W-AQ3E7A2 54 aa3.6□□□□□ -1.83
KIN28YDL108W YPK9Q12697 1472 aa3.6□□□□□ -1.83
KIN28YDL108W SIN3P22579 1536 aa3.6□□□□□ -1.83
KIN28YDL108W ECM12O13529 151 aa3.59□□□□□ -1.83
KIN28YDL108W TRP1P00912 224 aa3.59□□□□□ -1.83
KIN28YDL108W MDH2P22133 377 aa3.59□□□□□ -1.83
KIN28YDL108W YCR050CP25630 102 aa3.59□□□□□ -1.83
KIN28YDL108W YBL059WP34224 193 aa3.59□□□□□ -1.83
KIN28YDL108W MRPL11P36521 249 aaPredicted RBP3.59□□□□□ -1.83
KIN28YDL108W SPO73P40031 143 aa3.59□□□□□ -1.83
KIN28YDL108W YJL028WP47062 111 aa3.59□□□□□ -1.83
KIN28YDL108W EAF6P47128 113 aa3.59□□□□□ -1.83
KIN28YDL108W UPS3Q04006 179 aa3.59□□□□□ -1.83
KIN28YDL108W PBA1Q05778 276 aa3.59□□□□□ -1.83
KIN28YDL108W ATG5Q12380 294 aa3.59□□□□□ -1.83
KIN28YDL108W UBR1P19812 1950 aa3.58□□□□□ -1.84
KIN28YDL108W FUN14P18411 198 aa3.58□□□□□ -1.84
KIN28YDL108W YGL010WP25338 174 aa3.58□□□□□ -1.84
KIN28YDL108W YET1P35723 206 aa3.58□□□□□ -1.84
KIN28YDL108W YER134CP40081 178 aa3.58□□□□□ -1.84
KIN28YDL108W YER135CP40082 130 aa3.58□□□□□ -1.84
KIN28YDL108W SWM2P40342 146 aa3.58□□□□□ -1.84
KIN28YDL108W YFR035CP43608 114 aa3.58□□□□□ -1.84
KIN28YDL108W SYM1Q06563 197 aa3.58□□□□□ -1.84
KIN28YDL108W RAF1Q06891 181 aa3.58□□□□□ -1.84
KIN28YDL108W SDH3P33421 198 aa3.57□□□□□ -1.84
KIN28YDL108W VTC1P40046 129 aaRIP-Chip data3.57□□□□□ -1.84not detected
KIN28YDL108W YNL200CP40165 246 aaKnown RBP3.57□□□□□ -1.84
KIN28YDL108W ROM2P51862 1356 aaKnown RBP3.57□□□□□ -1.84
KIN28YDL108W CLD1P53264 445 aa3.57□□□□□ -1.84
KIN28YDL108W YOS1Q3E834 85 aa3.57□□□□□ -1.84
KIN28YDL108W DUR1,2P32528 1835 aaKnown RBP3.56□□□□□ -1.84
KIN28YDL108W MMS22Q06164 1454 aa3.56□□□□□ -1.84
KIN28YDL108W DDR48P18899 430 aaKnown RBP3.56□□□□□ -1.84
KIN28YDL108W FYV4P38783 130 aaPredicted RBP3.56□□□□□ -1.84
KIN28YDL108W PTH1P38876 190 aaKnown RBP3.56□□□□□ -1.84
KIN28YDL108W PIR5P46999 287 aa3.56□□□□□ -1.84
KIN28YDL108W ERG25P53045 309 aa3.56□□□□□ -1.84
KIN28YDL108W TIM22Q12328 207 aa3.56□□□□□ -1.84
KIN28YDL108W RPL21BQ12672 160 aaKnown RBP3.56□□□□□ -1.84
KIN28YDL108W YAL063C-AQ3E791 96 aa3.56□□□□□ -1.84
KIN28YDL108W SEC7P11075 2009 aaKnown RBP3.55□□□□□ -1.84
KIN28YDL108W YAR023CD6VPM8 179 aa3.55□□□□□ -1.84
KIN28YDL108W ATP15P21306 62 aa3.55□□□□□ -1.84
KIN28YDL108W LSM2P38203 95 aaKnown RBP3.55□□□□□ -1.84
KIN28YDL108W YPI1P43587 155 aa3.55□□□□□ -1.84
KIN28YDL108W MRPS8Q03799 155 aa3.55□□□□□ -1.84
KIN28YDL108W MIX14Q04341 121 aa3.55□□□□□ -1.84
KIN28YDL108W PRM3Q08931 133 aa3.55□□□□□ -1.84
KIN28YDL108W DFM1Q12743 341 aaKnown RBP3.55□□□□□ -1.84
KIN28YDL108W YOR376W-AQ3E805 51 aa3.55□□□□□ -1.84
KIN28YDL108W COA6Q3E846 104 aa3.55□□□□□ -1.84
KIN28YDL108W PAI3P01094 68 aa3.54□□□□□ -1.84
KIN28YDL108W INO4P13902 151 aa3.54□□□□□ -1.84
KIN28YDL108W MIG1P27705 504 aa3.54□□□□□ -1.84
KIN28YDL108W RPA12P32529 125 aaKnown RBP3.54□□□□□ -1.84
KIN28YDL108W SSS1P35179 80 aa3.54□□□□□ -1.84
KIN28YDL108W PHO88P38264 188 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms