RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C SHE2P36068 246 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
RPN4YDL020C POP7P38291 140 aa2.15□□□□□ -2.06
RPN4YDL020C HTD2P38790 280 aaKnown RBP2.15□□□□□ -2.06
RPN4YDL020C GLE2P40066 365 aa2.15□□□□□ -2.06
RPN4YDL020C YNL140CP53910 189 aa2.15□□□□□ -2.06
RPN4YDL020C BUD25P85052 153 aa2.15□□□□□ -2.06
RPN4YDL020C HNT1Q04344 158 aaKnown RBP2.15□□□□□ -2.06
RPN4YDL020C SLH1P53327 1967 aaKnown RBP2.15□□□□□ -2.07
RPN4YDL020C HAP2P06774 265 aa2.15□□□□□ -2.07
RPN4YDL020C YBL010CP32788 280 aa2.15□□□□□ -2.07
RPN4YDL020C EMP24P32803 203 aaKnown RBP2.15□□□□□ -2.07
RPN4YDL020C PAU24P38155 120 aa2.15□□□□□ -2.07
RPN4YDL020C YEL073CP39974 107 aa2.15□□□□□ -2.07
RPN4YDL020C YFR054CP43622 192 aa2.15□□□□□ -2.07
RPN4YDL020C SNN1P48232 102 aa2.15□□□□□ -2.07
RPN4YDL020C RNH202Q05635 350 aa2.15□□□□□ -2.07
RPN4YDL020C YPR127WQ06494 345 aa2.15□□□□□ -2.07
RPN4YDL020C PEX11Q12462 236 aa2.15□□□□□ -2.07
RPN4YDL020C YLR099W-AQ3E798 87 aa2.15□□□□□ -2.07
RPN4YDL020C VMA9Q3E7B6 73 aa2.15□□□□□ -2.07
RPN4YDL020C MBF1O14467 151 aaKnown RBP2.14□□□□□ -2.07
RPN4YDL020C RPL35AP0CX84 120 aaKnown RBP2.14□□□□□ -2.07
RPN4YDL020C RPL35BP0CX85 120 aaKnown RBP2.14□□□□□ -2.07
RPN4YDL020C GCV3P39726 170 aaPredicted RBP2.14□□□□□ -2.07
RPN4YDL020C PAC10P48363 199 aa2.14□□□□□ -2.07
RPN4YDL020C SAY1P53324 424 aa2.14□□□□□ -2.07
RPN4YDL020C PAU12P53343 120 aa2.14□□□□□ -2.07
RPN4YDL020C KEI1Q06346 221 aa2.14□□□□□ -2.07
RPN4YDL020C ANT1Q06497 328 aa2.14□□□□□ -2.07
RPN4YDL020C YLR036CQ07986 203 aa2.14□□□□□ -2.07
RPN4YDL020C RDI1Q12434 202 aa2.14□□□□□ -2.07
RPN4YDL020C PCC1Q3E833 88 aa2.14□□□□□ -2.07
RPN4YDL020C IGO2Q9P305 131 aa2.14□□□□□ -2.07
RPN4YDL020C CPA1P07258 411 aaKnown RBP2.13□□□□□ -2.07
RPN4YDL020C TRX3P25372 127 aa2.13□□□□□ -2.07
RPN4YDL020C MRP17P28778 131 aa2.13□□□□□ -2.07
RPN4YDL020C PAU2P32612 120 aa2.13□□□□□ -2.07
RPN4YDL020C PRS3P38689 320 aaKnown RBP2.13□□□□□ -2.07
RPN4YDL020C POG1P40473 351 aa2.13□□□□□ -2.07
RPN4YDL020C PAM16P42949 149 aa2.13□□□□□ -2.07
RPN4YDL020C MOG1P47123 218 aa2.13□□□□□ -2.07
RPN4YDL020C YCL001W-AP87012 153 aa2.13□□□□□ -2.07
RPN4YDL020C YDC1Q02896 317 aa2.13□□□□□ -2.07
RPN4YDL020C YPD1Q07688 167 aa2.13□□□□□ -2.07
RPN4YDL020C ZEO1Q08245 113 aa2.13□□□□□ -2.07
RPN4YDL020C YLR046CQ12253 270 aa2.13□□□□□ -2.07
RPN4YDL020C STT4P37297 1900 aa2.13□□□□□ -2.07
RPN4YDL020C COX9P07255 59 aa2.12□□□□□ -2.07
RPN4YDL020C YFR010W-AP0C5N0 62 aa2.12□□□□□ -2.07
RPN4YDL020C OCH1P31755 480 aa2.12□□□□□ -2.07
RPN4YDL020C SFK1P35735 353 aa2.12□□□□□ -2.07
RPN4YDL020C AIM2P39721 246 aa2.12□□□□□ -2.07
RPN4YDL020C YNL184CP53876 108 aa2.12□□□□□ -2.07
RPN4YDL020C NRK1P53915 240 aa2.12□□□□□ -2.07
RPN4YDL020C ARL3Q02804 198 aa2.12□□□□□ -2.07
RPN4YDL020C PIR1Q03178 341 aa2.12□□□□□ -2.07
RPN4YDL020C YMR252CQ04814 134 aa2.12□□□□□ -2.07
RPN4YDL020C YPR114WQ06107 315 aa2.12□□□□□ -2.07
RPN4YDL020C YOR385WQ08909 290 aa2.12□□□□□ -2.07
RPN4YDL020C SPC3Q12133 184 aa2.12□□□□□ -2.07
RPN4YDL020C ATG40Q99325 256 aa2.12□□□□□ -2.07
RPN4YDL020C YOL162WP0CF19 215 aa2.11□□□□□ -2.07
RPN4YDL020C CPR5P35176 225 aa2.11□□□□□ -2.07
RPN4YDL020C ATG8P38182 117 aaRIP-Chip data2.11□□□□□ -2.07not detected
RPN4YDL020C YBR219CP38317 127 aa2.11□□□□□ -2.07
RPN4YDL020C RPS20P38701 121 aaKnown RBP2.11□□□□□ -2.07
RPN4YDL020C TVP23P38962 199 aa2.11□□□□□ -2.07
RPN4YDL020C NSE4P43124 402 aa2.11□□□□□ -2.07
RPN4YDL020C ARP3P47117 449 aaKnown RBP2.11□□□□□ -2.07
RPN4YDL020C YJR111CP47148 283 aaKnown RBP2.11□□□□□ -2.07
RPN4YDL020C YGL101WP53144 215 aa2.11□□□□□ -2.07
RPN4YDL020C PGA1P53896 198 aa2.11□□□□□ -2.07
RPN4YDL020C YMR315WQ04869 349 aaKnown RBP2.11□□□□□ -2.07
RPN4YDL020C NOC4Q06512 552 aaPredicted RBP2.11□□□□□ -2.07
RPN4YDL020C YPR145C-AQ2V2P0 78 aa2.11□□□□□ -2.07
RPN4YDL020C FLO9P39712 1322 aa2.11□□□□□ -2.07
RPN4YDL020C ADK1P07170 222 aaKnown RBP2.1□□□□□ -2.07
RPN4YDL020C UBI4P0CG63 381 aaKnown RBP2.1□□□□□ -2.07
RPN4YDL020C RPL40AP0CH08 128 aaKnown RBP2.1□□□□□ -2.07
RPN4YDL020C RPL40BP0CH09 128 aaKnown RBP2.1□□□□□ -2.07
RPN4YDL020C YBR209WP38311 105 aa2.1□□□□□ -2.07
RPN4YDL020C RFC2P40348 353 aa2.1□□□□□ -2.07
RPN4YDL020C APQ12P40532 138 aa2.1□□□□□ -2.07
RPN4YDL020C GNA1P43577 159 aaPredicted RBP2.1□□□□□ -2.07
RPN4YDL020C SOL1P50278 321 aa2.1□□□□□ -2.07
RPN4YDL020C ERV14P53173 138 aa2.1□□□□□ -2.07
RPN4YDL020C SNO1Q03144 224 aa2.1□□□□□ -2.07
RPN4YDL020C SCP1Q08873 200 aa2.1□□□□□ -2.07
RPN4YDL020C MSB2P32334 1306 aa2.1□□□□□ -2.07
RPN4YDL020C KIN28P06242 306 aa2.1□□□□□ -2.07
RPN4YDL020C TRR1P29509 319 aaKnown RBP2.1□□□□□ -2.07
RPN4YDL020C SHG1P38337 142 aa2.1□□□□□ -2.07
RPN4YDL020C YER121WP40076 114 aa2.1□□□□□ -2.07
RPN4YDL020C EMC5P40540 141 aa2.1□□□□□ -2.07
RPN4YDL020C SKI6P46948 246 aaPredicted RBP2.1□□□□□ -2.07
RPN4YDL020C YGL204CP53089 101 aa2.1□□□□□ -2.07
RPN4YDL020C YOL024WQ08172 172 aa2.1□□□□□ -2.07
RPN4YDL020C ODC2Q99297 307 aa2.1□□□□□ -2.07
RPN4YDL020C SEC59P20048 519 aa2.09□□□□□ -2.08
RPN4YDL020C YCR101CP25607 182 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms