RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W NIP7Q08962 181 aaKnown RBP1.98□□□□□ -2.09
SPB1YCL054W YOR289WQ12012 251 aaPredicted RBP1.98□□□□□ -2.09
SPB1YCL054W YFR032C-BQ8TGU2 87 aa1.98□□□□□ -2.09
SPB1YCL054W Q0255P03881 472 aa1.97□□□□□ -2.09
SPB1YCL054W YHR214C-DP0CX93 97 aa1.97□□□□□ -2.09
SPB1YCL054W RPF1P38805 295 aaKnown RBP1.97□□□□□ -2.09
SPB1YCL054W NSG1P38837 291 aa1.97□□□□□ -2.09
SPB1YCL054W YNL200CP40165 246 aaKnown RBP1.97□□□□□ -2.09
SPB1YCL054W RFC2P40348 353 aa1.97□□□□□ -2.09
SPB1YCL054W TTI2P47168 421 aa1.97□□□□□ -2.09
SPB1YCL054W COF1Q03048 143 aaKnown RBP1.97□□□□□ -2.09
SPB1YCL054W LPP1Q04396 274 aa1.97□□□□□ -2.09
SPB1YCL054W YLR099W-AQ3E798 87 aa1.97□□□□□ -2.09
SPB1YCL054W SGA1P08019 549 aa1.97□□□□□ -2.09
SPB1YCL054W TEM1P38987 245 aa1.97□□□□□ -2.09
SPB1YCL054W YPL073CP40323 161 aa1.97□□□□□ -2.09
SPB1YCL054W DLS1P40366 167 aa1.97□□□□□ -2.09
SPB1YCL054W FYV7Q12247 151 aa1.97□□□□□ -2.09
SPB1YCL054W ATP14Q12349 124 aa1.97□□□□□ -2.09
SPB1YCL054W SLO1Q3E784 85 aa1.97□□□□□ -2.09
SPB1YCL054W TSC3Q3E790 80 aa1.97□□□□□ -2.09
SPB1YCL054W TDA8Q6B2U8 126 aa1.97□□□□□ -2.09
SPB1YCL054W PBI2P0CT04 75 aaKnown RBP1.96□□□□□ -2.09
SPB1YCL054W CKS1P20486 150 aaKnown RBP1.96□□□□□ -2.09
SPB1YCL054W YHR180WP38868 163 aa1.96□□□□□ -2.09
SPB1YCL054W YFR045WP43617 309 aa1.96□□□□□ -2.09
SPB1YCL054W FIP1P45976 327 aa1.96□□□□□ -2.09
SPB1YCL054W DIG2Q03373 323 aaKnown RBP1.96□□□□□ -2.09
SPB1YCL054W GPI11Q06636 219 aa1.96□□□□□ -2.09
SPB1YCL054W YPL162CQ12042 273 aa1.96□□□□□ -2.09
SPB1YCL054W YOR214CQ12282 236 aa1.96□□□□□ -2.09
SPB1YCL054W ATO3Q12359 275 aa1.96□□□□□ -2.09
SPB1YCL054W MHF2Q3E829 80 aa1.96□□□□□ -2.09
SPB1YCL054W YRA2P36036 203 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SPB1YCL054W PDX3P38075 228 aaKnown RBP1.96□□□□□ -2.1
SPB1YCL054W MPM1P40364 252 aa1.96□□□□□ -2.1
SPB1YCL054W YGR219WP53307 113 aa1.96□□□□□ -2.1
SPB1YCL054W DGK1Q12382 290 aa1.96□□□□□ -2.1
SPB1YCL054W FLO9P39712 1322 aa1.96□□□□□ -2.1
SPB1YCL054W RPB3P16370 318 aaKnown RBP1.95□□□□□ -2.1
SPB1YCL054W MDH2P22133 377 aa1.95□□□□□ -2.1
SPB1YCL054W TFC1P32367 649 aa1.95□□□□□ -2.1
SPB1YCL054W GSP1P32835 219 aaKnown RBP1.95□□□□□ -2.1
SPB1YCL054W GSP2P32836 220 aaKnown RBP1.95□□□□□ -2.1
SPB1YCL054W SHE2P36068 246 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SPB1YCL054W RPS20P38701 121 aaKnown RBP1.95□□□□□ -2.1
SPB1YCL054W VMA7P39111 118 aa1.95□□□□□ -2.1
SPB1YCL054W TDA4P47153 279 aa1.95□□□□□ -2.1
SPB1YCL054W MPC1P53157 130 aaKnown RBP1.95□□□□□ -2.1
SPB1YCL054W IGO1P53897 168 aa1.95□□□□□ -2.1
SPB1YCL054W SDH7Q04401 133 aa1.95□□□□□ -2.1
SPB1YCL054W CNL1Q06333 122 aa1.95□□□□□ -2.1
SPB1YCL054W PRP11Q07350 266 aaPredicted RBP1.95□□□□□ -2.1
SPB1YCL054W MCP1Q12106 302 aa1.95□□□□□ -2.1
SPB1YCL054W GEP5Q12393 293 aa1.95□□□□□ -2.1
SPB1YCL054W PAN3P36102 679 aaPredicted RBP1.95□□□□□ -2.1
SPB1YCL054W SKG1P36169 355 aa1.95□□□□□ -2.1
SPB1YCL054W CTR2P38865 189 aa1.95□□□□□ -2.1
SPB1YCL054W OST2P46964 130 aa1.95□□□□□ -2.1
SPB1YCL054W GIS2P53849 153 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1 RIP-Chip
SPB1YCL054W APJ1P53940 528 aa1.95□□□□□ -2.1
SPB1YCL054W HHT1P61830 136 aa1.95□□□□□ -2.1
SPB1YCL054W VPS71Q03433 280 aa1.95□□□□□ -2.1
SPB1YCL054W SCW10Q04951 389 aa1.95□□□□□ -2.1
SPB1YCL054W RNH202Q05635 350 aa1.95□□□□□ -2.1
SPB1YCL054W NAT3Q06504 195 aa1.95□□□□□ -2.1
SPB1YCL054W HTL1Q9URQ5 78 aa1.95□□□□□ -2.1
SPB1YCL054W REP2P03872 296 aa1.94□□□□□ -2.1
SPB1YCL054W ATP15P21306 62 aa1.94□□□□□ -2.1
SPB1YCL054W BUD23P25627 275 aaPredicted RBP1.94□□□□□ -2.1
SPB1YCL054W SPT14P32363 452 aa1.94□□□□□ -2.1
SPB1YCL054W FCY21P40039 528 aa1.94□□□□□ -2.1
SPB1YCL054W SMD3P43321 101 aaKnown RBP1.94□□□□□ -2.1
SPB1YCL054W YFL019CP43576 117 aa1.94□□□□□ -2.1
SPB1YCL054W YCL042WP25572 119 aa1.94□□□□□ -2.1
SPB1YCL054W YBL010CP32788 280 aa1.94□□□□□ -2.1
SPB1YCL054W TIM12P32830 109 aa1.94□□□□□ -2.1
SPB1YCL054W MRPL24P36525 258 aaPredicted RBP1.94□□□□□ -2.1
SPB1YCL054W YER181CP40097 107 aa1.94□□□□□ -2.1
SPB1YCL054W GLR1P41921 483 aaKnown RBP1.94□□□□□ -2.1
SPB1YCL054W XPT1P47165 209 aa1.94□□□□□ -2.1
SPB1YCL054W YNR062CP53748 327 aa1.94□□□□□ -2.1
SPB1YCL054W YDR366CP87287 132 aa1.94□□□□□ -2.1
SPB1YCL054W IRC19Q07843 230 aa1.94□□□□□ -2.1
SPB1YCL054W YOR268CQ08734 132 aa1.94□□□□□ -2.1
SPB1YCL054W ISD11Q6Q560 94 aa1.94□□□□□ -2.1
SPB1YCL054W PHO85P17157 305 aa1.93□□□□□ -2.1
SPB1YCL054W RPL14AP36105 138 aaKnown RBP1.93□□□□□ -2.1
SPB1YCL054W YKR070WP36151 352 aaKnown RBP1.93□□□□□ -2.1
SPB1YCL054W RPL14BP38754 138 aaKnown RBP1.93□□□□□ -2.1
SPB1YCL054W FYV4P38783 130 aaPredicted RBP1.93□□□□□ -2.1
SPB1YCL054W PFS2P42841 465 aaKnown RBP1.93□□□□□ -2.1
SPB1YCL054W BAT2P47176 376 aaKnown RBP1.93□□□□□ -2.1
SPB1YCL054W APS2Q00381 147 aa1.93□□□□□ -2.1
SPB1YCL054W YKR005CQ02203 525 aa1.93□□□□□ -2.1
SPB1YCL054W DML1Q03652 475 aa1.93□□□□□ -2.1
SPB1YCL054W YDR391CQ04170 232 aa1.93□□□□□ -2.1
SPB1YCL054W RAF1Q06891 181 aa1.93□□□□□ -2.1
SPB1YCL054W HRT1Q08273 121 aa1.93□□□□□ -2.1
SPB1YCL054W YIR021W-AQ3E739 70 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 119.7 ms