RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 TAF2P23255 1407 aa3.59□□□□□ -1.84
NME1NME1 YGL041W-AP0C5N3 154 aa3.58□□□□□ -1.84
NME1NME1 YFL051CP43552 160 aa3.58□□□□□ -1.84
NME1NME1 KEI1Q06346 221 aa3.58□□□□□ -1.84
NME1NME1 SRP21P32342 167 aa3.57□□□□□ -1.84
NME1NME1 YEL014CP39999 101 aa3.57□□□□□ -1.84
NME1NME1 YDC1Q02896 317 aa3.57□□□□□ -1.84
NME1NME1 DDR48P18899 430 aaKnown RBP3.56□□□□□ -1.84
NME1NME1 LSM1P47017 172 aaKnown RBP3.56□□□□□ -1.84
NME1NME1 YKR070WP36151 352 aaKnown RBP3.55□□□□□ -1.84
NME1NME1 GLC8P41818 229 aa3.55□□□□□ -1.84
NME1NME1 EST3Q03096 181 aa3.55□□□□□ -1.84
NME1NME1 KIN28P06242 306 aa3.54□□□□□ -1.84
NME1NME1 YAP3P38749 330 aa3.54□□□□□ -1.84
NME1NME1 HUA1P40325 198 aa3.54□□□□□ -1.84
NME1NME1 APS3P47064 194 aa3.54□□□□□ -1.84
NME1NME1 IRC19Q07843 230 aa3.53□□□□□ -1.84
NME1NME1 CMC4Q3E7A9 73 aa3.53□□□□□ -1.84
NME1NME1 HSP12P22943 109 aaKnown RBP3.51□□□□□ -1.85
NME1NME1 ECM31P38122 312 aa3.51□□□□□ -1.85
NME1NME1 DCV1P43595 202 aa3.51□□□□□ -1.85
NME1NME1 SCS22Q6Q595 175 aa3.51□□□□□ -1.85
NME1NME1 HSP150P32478 413 aa3.49□□□□□ -1.85
NME1NME1 GPI2P46961 280 aa3.49□□□□□ -1.85
NME1NME1 FCY1Q12178 158 aa3.49□□□□□ -1.85
NME1NME1 YMR320WQ04897 101 aa3.48□□□□□ -1.85
NME1NME1 YDR366CP87287 132 aa3.47□□□□□ -1.85
NME1NME1 VAM10Q08474 114 aa3.47□□□□□ -1.85
NME1NME1 RBL2P48606 106 aaKnown RBP3.46□□□□□ -1.86
NME1NME1 IPT1P38954 527 aa3.45□□□□□ -1.86
NME1NME1 RPL37AP49166 88 aaKnown RBP3.44□□□□□ -1.86
NME1NME1 YPR153WQ06537 140 aa3.44□□□□□ -1.86
NME1NME1 YAR064WP39563 99 aa3.42□□□□□ -1.86
NME1NME1 RIF1P29539 1916 aa3.42□□□□□ -1.86
NME1NME1 SUI1P32911 108 aaKnown RBP3.41□□□□□ -1.86
NME1NME1 YBR027CP38220 110 aa3.41□□□□□ -1.86
NME1NME1 HYP2P23301 157 aaKnown RBP3.4□□□□□ -1.87
NME1NME1 YGR201CP42936 225 aa3.4□□□□□ -1.87
NME1NME1 HHO1P53551 258 aa3.39□□□□□ -1.87
NME1NME1 COF1Q03048 143 aaKnown RBP3.39□□□□□ -1.87
NME1NME1 VMA10P48836 114 aaKnown RBP3.38□□□□□ -1.87
NME1NME1 GPI11Q06636 219 aa3.37□□□□□ -1.87
NME1NME1 LCL2Q08045 131 aa3.37□□□□□ -1.87
NME1NME1 YIL102CP40488 101 aa3.36□□□□□ -1.87
NME1NME1 CCW12Q12127 133 aa3.36□□□□□ -1.87
NME1NME1 YGR039WP53225 103 aa3.35□□□□□ -1.87
NME1NME1 SLH1P53327 1967 aaKnown RBP3.34□□□□□ -1.87
NME1NME1 NHP6AP11632 93 aaKnown RBP3.34□□□□□ -1.87
NME1NME1 RPC19P28000 142 aaKnown RBP3.34□□□□□ -1.87
NME1NME1 UBR1P19812 1950 aa3.33□□□□□ -1.88
NME1NME1 COX5BP00425 151 aa3.33□□□□□ -1.88
NME1NME1 SPC3Q12133 184 aa3.3□□□□□ -1.88
NME1NME1 RPS1BP23248 255 aaKnown RBP3.29□□□□□ -1.88
NME1NME1 ATG8P38182 117 aaRIP-Chip data3.29□□□□□ -1.88not detected
NME1NME1 DIE2P50076 525 aa3.29□□□□□ -1.88
NME1NME1 SPG1P50088 95 aa3.29□□□□□ -1.88
NME1NME1 YCL001W-AP87012 153 aa3.29□□□□□ -1.88
NME1NME1 FYV5P25585 152 aa3.28□□□□□ -1.88
NME1NME1 HUT1Q12520 339 aa3.28□□□□□ -1.88
NME1NME1 LSM8P47093 109 aaKnown RBP3.27□□□□□ -1.89
NME1NME1 SED1Q01589 338 aa3.27□□□□□ -1.89
NME1NME1 SOM1Q05676 74 aa3.26□□□□□ -1.89
NME1NME1 RAF1Q06891 181 aa3.26□□□□□ -1.89
NME1NME1 TMA23Q03525 211 aa3.25□□□□□ -1.89
NME1NME1 RIB3Q99258 208 aa3.25□□□□□ -1.89
NME1NME1 DDP1Q99321 188 aaKnown RBP3.25□□□□□ -1.89
NME1NME1 YHR140WP38842 239 aa3.24□□□□□ -1.89
NME1NME1 UGX2P32772 223 aa3.23□□□□□ -1.89
NME1NME1 CSN9Q03981 162 aa3.23□□□□□ -1.89
NME1NME1 RPL33AP05744 107 aaKnown RBP3.21□□□□□ -1.9
NME1NME1 YCR001WP25347 104 aa3.21□□□□□ -1.9
NME1NME1 CYC2P38909 366 aa3.21□□□□□ -1.9
NME1NME1 PHB1P40961 287 aa3.21□□□□□ -1.9
NME1NME1 EMC4P53073 190 aa3.21□□□□□ -1.9
NME1NME1 MHF1Q3E835 90 aa3.21□□□□□ -1.9
NME1NME1 YOR385WQ08909 290 aa3.2□□□□□ -1.9
NME1NME1 HSL1P34244 1518 aa3.19□□□□□ -1.9
NME1NME1 YNL019CP53975 284 aa3.19□□□□□ -1.9
NME1NME1 SEN15Q04675 128 aa3.19□□□□□ -1.9
NME1NME1 YOL013W-AP0C272 63 aaPredicted RBP3.17□□□□□ -1.9
NME1NME1 RPL37BP51402 88 aaKnown RBP3.17□□□□□ -1.9
NME1NME1 YNL122CP53921 115 aaPredicted RBP3.17□□□□□ -1.9
NME1NME1 NAT5Q08689 176 aa3.16□□□□□ -1.9
NME1NME1 SRL3P36167 246 aa3.15□□□□□ -1.91
NME1NME1 YGL014C-AP0C5N1 53 aa3.14□□□□□ -1.91
NME1NME1 HPM1P40481 377 aa3.13□□□□□ -1.91
NME1NME1 YGL204CP53089 101 aa3.13□□□□□ -1.91
NME1NME1 FMP49A0A023PZB3 126 aa3.12□□□□□ -1.91
NME1NME1 MRPL44P19956 98 aa3.12□□□□□ -1.91
NME1NME1 RPS1AP33442 255 aaKnown RBP3.12□□□□□ -1.91
NME1NME1 HAP2P06774 265 aa3.11□□□□□ -1.91
NME1NME1 RPL14AP36105 138 aaKnown RBP3.11□□□□□ -1.91
NME1NME1 RPL14BP38754 138 aaKnown RBP3.11□□□□□ -1.91
NME1NME1 YOR072WQ08486 104 aa3.11□□□□□ -1.91
NME1NME1 YGR042WP53227 271 aa3.1□□□□□ -1.91
NME1NME1 AIM36Q03798 255 aa3.1□□□□□ -1.91
NME1NME1 SFT2P38166 215 aa3.09□□□□□ -1.91
NME1NME1 GIM4P40005 111 aaKnown RBP3.09□□□□□ -1.91
NME1NME1 ELC1Q03071 99 aa3.09□□□□□ -1.91
NME1NME1 CDC39P25655 2108 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms