RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 NAP1L5Q96NT1 182 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 LSM14BQ9BX40 385 aaKnown RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 RHOBTB2Q9BYZ6 727 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 ELOVL4Q9GZR5 314 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 UBE2TQ9NPD8 197 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 ABI2Q9NYB9 513 aaPredicted RBP14.08□□□□□ -0.16
GTF3A-209ENST00000640289 SLC27A5Q9Y2P5 690 aa14.08□□□□□ -0.16
GTF3A-209ENST00000640289 SOAT2O75908 522 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 C1RP00736 705 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 SERPINC1P01008 464 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 C8AP07357 584 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 SRGAP2BP0DMP2 458 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 ACO1P21399 889 aaKnown RBP14.07□□□□□ -0.16
GTF3A-209ENST00000640289 KCNA5P22460 613 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 ELF1P32519 619 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 FANCCQ00597 558 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 DUSP4Q13115 394 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 LIN9Q5TKA1 542 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 UNC93AQ86WB7 457 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 B3GALNT2Q8NCR0 500 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 MSLNLQ96KJ4 702 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 NT5C1AQ9BXI3 368 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 PLEKHA4Q9H4M7 779 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
GTF3A-209ENST00000640289 DZANK1Q9NVP4 752 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 APEX2Q9UBZ4 518 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 SIK3Q9Y2K2 1263 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
GTF3A-209ENST00000640289 PLXNA3P51805 1871 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 A0A1B0GTH6 734 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 PRRG1O14668 218 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 ZMYND10O75800 440 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 RAD23BP54727 409 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 MFAP3P55082 362 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TFF2Q03403 129 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SYCP1Q15431 976 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 NFE2Q16621 373 aaPredicted RBP14.06□□□□□ -0.16
GTF3A-209ENST00000640289 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 RARS2Q5T160 578 aaKnown RBP14.06□□□□□ -0.16
GTF3A-209ENST00000640289 KLHDC7AQ5VTJ3 777 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TMEM270Q6UE05 265 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TMC5Q6UXY8 1006 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SPATA2LQ8IUW3 424 aaPredicted RBP14.06□□□□□ -0.16
GTF3A-209ENST00000640289 CRYBG2Q8N1P7 616 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 C12orf29Q8N999 325 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SPPL2BQ8TCT7 592 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 HDAC7Q8WUI4 952 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 PCED1BQ96HM7 432 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SEPT5Q99719 369 aaPredicted RBP14.06□□□□□ -0.16
GTF3A-209ENST00000640289 RBSNQ9H1K0 784 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 SFXN1Q9H9B4 322 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 FAM49BQ9NUQ9 324 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 DPP7Q9UHL4 492 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 DNAJC12Q9UKB3 198 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 YIPF1Q9Y548 306 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 INSL5Q9Y5Q6 135 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 FHOD1Q9Y613 1164 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 TRANK1O15050 2925 aa14.06□□□□□ -0.16
GTF3A-209ENST00000640289 CCDC195A0A1B0GUA6 201 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 RNF225M0QZC1 329 aaPredicted RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CLDN5O00501 218 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 EPHB6O15197 1021 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CCL16O15467 120 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CALCAP01258 141 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CCDC130P13994 396 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CYP2F1P24903 491 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 GPR15P49685 360 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 YWHAEP62258 255 aaKnown RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 SMARCB1Q12824 385 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 UVSSAQ2YD98 709 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 MGAT5BQ3V5L5 792 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 FILIP1LQ4L180 1135 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 PCMTD1Q96MG8 357 aaPredicted RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 ERGIC2Q96RQ1 377 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 B3GNT5Q9BYG0 378 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 ZNF518BQ9C0D4 1074 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 S1PR5Q9H228 398 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 GANQ9H2C0 597 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 FAM207AQ9NSI2 230 aaPredicted RBP14.05□□□□□ -0.16
GTF3A-209ENST00000640289 CD207Q9UJ71 328 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 COG5Q9UP83 839 aa14.05□□□□□ -0.16
GTF3A-209ENST00000640289 NOL4O94818 638 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 PNMA6AP0CW24 399 aaPredicted RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 HAPLN1P10915 354 aaPredicted RBP14.04□□□□□ -0.16
GTF3A-209ENST00000640289 UCHL3P15374 230 aa14.04□□□□□ -0.16
GTF3A-209ENST00000640289 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms