RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 KIF12Q96FN5 646 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 CCDC114Q96M63 670 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 SEMA4AQ9H3S1 761 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 PLEKHA5Q9HAU0 1116 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 KLHL11Q9NVR0 708 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 TJP2Q9UDY2 1190 aa20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 BARX2Q9UMQ3 279 aaPredicted RBP20.82■□□□□ 0.92
PCDHB11-202ENST00000624887 PI4K2BG5E9Z4 385 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 GOLGA8SH3BPF8 625 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 MICAL2O94851 1124 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SMIM10L2AP0DMW4 78 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SMIM10L2BP0DMW5 78 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 PTPN7P35236 360 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 PSMC1P62191 440 aaKnown RBP20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 PDCLQ13371 301 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 ZNF268Q14587 947 aaPredicted RBP20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 PRAMEF19Q5SWL8 479 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 MFSD7Q6UXD7 560 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 HOOK3Q86VS8 718 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 KAT2BQ92831 832 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 FAM49AQ9H0Q0 323 aaPredicted RBP20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 DERAQ9Y315 318 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 RALGAPA2Q2PPJ7 1873 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 DOCK3Q8IZD9 2030 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SMIM35A0A1B0GVV1 85 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 MBLAC1A4D2B0 266 aaPredicted RBP20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 TJP3O95049 919 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 NPTXRO95502 500 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SHBGP04278 402 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SLC29A2Q14542 456 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 PCBP1Q15365 356 aaKnown RBP eCLIP20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 ZFYVE27Q5T4F4 411 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SLC27A1Q6PCB7 646 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 POLNQ7Z5Q5 900 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 XYLT1Q86Y38 959 aa20.81■□□□□ 0.92
PCDHB11-202ENST00000624887 SLC10A3P09131 477 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 KRT10P13645 584 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 PSMA2P25787 234 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 GABRB2P47870 512 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 CAV1Q03135 178 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 ADCY2Q08462 1091 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 TMEM62Q0P6H9 643 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 TTC19Q6DKK2 380 aaPredicted RBP20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 TXNRD3NBQ6F5E7 133 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 SPOCD1Q6ZMY3 1216 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 CATSPER4Q7RTX7 472 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 JOSD2Q8TAC2 188 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 HEXIM2Q96MH2 286 aaKnown RBP20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 SYNCQ9H7C4 482 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 LRRC4CQ9HCJ2 640 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 BCCIPQ9P287 314 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 GINS2Q9Y248 185 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 TRIP11Q15643 1979 aa20.8■□□□□ 0.92
PCDHB11-202ENST00000624887 M0QYV0 167 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 RIPK2O43353 540 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ERBB2P04626 1255 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ATF2P15336 505 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 GPD2P43304 727 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 NDST1P52848 882 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 IRX5P78411 483 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ODF2Q5BJF6 829 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 DRICH1Q6PGQ1 229 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 CCDC89Q8N998 374 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 RAPGEF5Q92565 580 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 CDHR5Q9HBB8 845 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 FLRT1Q9NZU1 646 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 KIAA1257Q9ULG3 409 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 NOVA2Q9UNW9 492 aaKnown RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TLL2Q9Y6L7 1015 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ZNF865P0CJ78 1059 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ATF7P17544 494 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 HPDP32754 393 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 LMNB2Q03252 620 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 MYO1EQ12965 1108 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TRIP13Q15645 432 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TFDP3Q5H9I0 405 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 KAZNQ674X7 775 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 NOTUMQ6P988 496 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 ZNF365Q70YC5 407 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TRMT10CQ7L0Y3 403 aaKnown RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TLK2Q86UE8 772 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 SNX27Q96L92 541 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 FAM118BQ9BPY3 351 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 TRAIPQ9BWF2 469 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 GPBP1L1Q9HC44 474 aaPredicted RBP20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 AAASQ9NRG9 546 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 SNTG2Q9NY99 539 aa20.79■□□□□ 0.92
PCDHB11-202ENST00000624887 hCG_1818297A0A087WSY0 165 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 LIASO43766 372 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 CYP2C9P11712 490 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 DARSP14868 501 aaKnown RBP20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 ADCY8P40145 1251 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 MDH1P40925 334 aaKnown RBP20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 ITGA8P53708 1063 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 INHBEP58166 350 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 SLC25A11Q02978 314 aaKnown RBP20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 MFSD10Q14728 455 aa20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 TAF1CQ15572 869 aaPredicted RBP20.78■□□□□ 0.92
PCDHB11-202ENST00000624887 OLFML2BQ68BL8 750 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms