RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 RAP1GAPP47736 663 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 MARCKSL1P49006 195 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 PSMC1P62191 440 aaKnown RBP17.27■□□□□ 0.36
LDB3-208ENST00000623007 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 UBXN11Q5T124 520 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 DENND1BQ6P3S1 775 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 CEP128Q6ZU80 1094 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 CCDC105Q8IYK2 499 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 BBOF1Q8ND07 529 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 TNIP3Q96KP6 325 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 MCEEQ96PE7 176 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 TRAIPQ9BWF2 469 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 SEZ6LQ9BYH1 1024 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.36
LDB3-208ENST00000623007 MTRF1LQ9UGC7 380 aaKnown RBP17.27■□□□□ 0.36
LDB3-208ENST00000623007 CHORDC1Q9UHD1 332 aaPredicted RBP17.27■□□□□ 0.36
LDB3-208ENST00000623007 IPPQ9Y573 584 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 TTI1O43156 1089 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 RNF8O76064 485 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 ECEL1O95672 775 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 SCNN1AP37088 669 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 GPD2P43304 727 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 PRKCZQ05513 592 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 PDCLQ13371 301 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 HIC1Q14526 733 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CCNG2Q16589 344 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 PTPN20Q4JDL3 420 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 RNF180Q86T96 592 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 JAMLQ86YT9 394 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CCDC50Q8IVM0 306 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 TOP6BLQ8N6T0 577 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 TMEM40Q8WWA1 233 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 ZMAT2Q96NC0 199 aaKnown RBP17.26■□□□□ 0.35
LDB3-208ENST00000623007 UBN1Q9NPG3 1134 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 GIT1Q9Y2X7 761 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 KPNA7A9QM74 516 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 GOLGA8KD6RF30 607 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 KIF3CO14782 793 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 SSR1P43307 286 aaKnown RBP17.26■□□□□ 0.35
LDB3-208ENST00000623007 CAV1Q03135 178 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CACNB2Q08289 660 aaPredicted RBP17.26■□□□□ 0.35
LDB3-208ENST00000623007 DEFB115Q30KQ5 88 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 DUPD1Q68J44 220 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 LRIG3Q6UXM1 1119 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CROCCP2Q86T23 111 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 FAM228AQ86W67 206 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 CRYBG2Q8N1P7 616 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 APPL2Q8NEU8 664 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 SPATA18Q8TC71 538 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 PXYLP1Q8TE99 480 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 MCRS1Q96EZ8 462 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 ASNSD1Q9NWL6 643 aa17.26■□□□□ 0.35
LDB3-208ENST00000623007 A6NNZ2 444 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 PSMA2P25787 234 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 ACADSBP45954 432 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 PRMT2P55345 433 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 SLC8A3P57103 927 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 DRICH1Q6PGQ1 229 aaPredicted RBP17.25■□□□□ 0.35
LDB3-208ENST00000623007 CXCL17Q6UXB2 119 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 XYLT1Q86Y38 959 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 ATL2Q8NHH9 583 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 FMO2Q99518 471 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 OSBPL8Q9BZF1 889 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 SENP6Q9GZR1 1112 aaPredicted RBP17.25■□□□□ 0.35
LDB3-208ENST00000623007 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 TSPAN16Q9UKR8 245 aa17.25■□□□□ 0.35
LDB3-208ENST00000623007 HUS1O60921 280 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 RARAP10276 462 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 PCK1P35558 622 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 RPL7AP62424 266 aaKnown RBP17.24■□□□□ 0.35
LDB3-208ENST00000623007 ZNF200P98182 395 aaPredicted RBP17.24■□□□□ 0.35
LDB3-208ENST00000623007 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
LDB3-208ENST00000623007 PTK7Q13308 1070 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 SCARA3Q6AZY7 606 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 ARCQ7LC44 396 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 LIMS2Q7Z4I7 341 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 TTC13Q8NBP0 860 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 TWNKQ96RR1 684 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
LDB3-208ENST00000623007 TUBGCP4Q9UGJ1 667 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 SRRDQ9UH36 339 aa17.24■□□□□ 0.35
LDB3-208ENST00000623007 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 MYADML2A6NDP7 307 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 MOXD2PA6NHM9 499 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 A8MXQ7 604 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ZNF623O75123 536 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 PGK1P00558 417 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ERBB2P04626 1255 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 ASGR1P07306 291 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 PRKAR2AP13861 404 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 RPL9P32969 192 aaKnown RBP17.23■□□□□ 0.35
LDB3-208ENST00000623007 PTGIRP43119 386 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 BCAT1P54687 386 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 CALCOCO2Q13137 446 aa17.23■□□□□ 0.35
LDB3-208ENST00000623007 KLF1Q13351 362 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms